Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03857 ATGAACATTATTATCCTCTCAATCTGGTGTTTGTTACCTGTGCTATGCCTATGTAACTCAAGAGCTACGTATATAGTCCACATGGACAAGTCTCATATGCCCAAAGTTTTCACCTCCCAACGCCACTGGTATTCATCCACCCTTACTTCCCTCGACTCTGCCACTCCTATTTTGTACTCTTACGACAACGCACTTCACGGCTTCAGTGTTGCATTGTCACCACACCAATTGGAGACTCTAAAGCAAACCCCAGGTTTCATCTCAGCATACAGAGACAGAGCAACCACGCTCGACACCACCCAATCTTACAGCTTCCTCTCTCTCAACCACTCCCACGGCCTCTGGCCCGCTTCCAACTACGCCCAAAACGTCGTCGTTGGAGTCATCGATTCCGGAATCTGGCCTGAGAGCGAAAGCTTCAAAGACGATGGCATGCCAACTCAAACTCCTCCAAAATGGAAGGGAGGATGCCAGGGTGGGGAAAGCTTTGACCCCTCTCTCTGTAACTCCAAACTCATAGGCGCAAGGTATTTCAACAAAGGTCTTCTCGCAGCGCATGACGCTACCAAAATTGGCGCCAACTCCGTTAGAGACATCGTGGGACACGGGACCCACACCGCGTCCACGGTCGCTGGCAACTACGTAAACGGGGCGTCGTATTTCGGTTACGCCAAGGGCACAGCCAGAGGAATTGCGCCACGTGCTAAAATTGCAATTTACAAGGTTGCGTGGGCCCAAGGCGTATACGCCTCGGACATTCTAGCAGGTTTGGACCAAGCAATCGCTGACGGAGTGGACGTGATTTCAATCTCAATGGGATTCGATATGGTGCCCTTGTACGAGGATCCTGTAGCCATAGCCGCTTTCTCCGCTTTGGAGAAAGGCGTGGTGGTTTCAGCTTCAGCGGGAAACGCAGGTCCCTTACTCGGCTCCTTACATAACGGGATTCCCTGGGTTTTAACGGTTGGAGCGAGCAACACAGAGCGTTTTTTCGGCGGGACGTTAATTCTGGGTAACGGGAAGAGGTTTTCGGGGTGGACTCTGTTCCCGGCAAGCGCCACGGTGAATGACCTTCCTCTGGTTTACCATAACAACGCTTCGGCGTGTGACTCTTCTAAACTCTTGTCACAAGTAGCACGTGGCAGCATCGTCATATGCGATTCTCTTATGGACGTTAACCAACAGATTGAGCACGTGTCTTTGTCTCAAGTGTATGGAGCTGTGTTTATATCAAGTGATCCCAGACTGTTTGAACTGGGAAAAATGACGTGTCCTGGGGTTGTGATTAGCCCTCAGGATGGGGAAAATGTGATCAAATATGCACGAGGGACACGACGCGCTTCGGCGACCATAAAATTTCAAGAAACCTACGTTGGAACGAAACGGGCTCCCACGGTGGCTAGTTACAGTTCCAGAGGCCCATCTTGGGAATGTCCCTGGGTATTGAAGCCCGACTTGATGGCCCCTGGGTCATCGATTTTGGCGGCTTGGGTTCCGAATTTGCCGGCGGCCCAAATTGGCCCAAACTTGCTGTTAAATAATGAATACAATTTGTTGTCGGGGACGTCGATGGCGTGCCCTCATGCTTCCGGGGTGGTGGCTCTGTTGAAGAATGCACACCCTGAGTGGAGTGCTTCGGCTGTTAGGTCTGCGTTGACAACCACGGCTAGCCCACTGGATAACACTGGAAAGCCCATTGAAGAAAATGGAGAGTGGCCTCAACGGGCTTCTCCTCTAGCCATGGGGGCCGGCCTGATTGACCCTAACCGGGCCCTTGACCCTGGTTTGGTTTATGATGCCACCCCTCAAGACTATGTTAACCTCCTCTGTGCGATGAATTTCACTCAGGCTCAGATCATGGCCATTACTAGATCAAAGGCCTATAATTGCTCGAGTCCATCTTATGACCTCAATTATCCTTCTTTCGTGGCTTTCTATGCTAACAACAAGAGTGTGAAAGTGGAGACAAAATTCCGGAGAAGTGTGACTTACGTTGGAGATGGTCCAGCTGCTTACACTGCACGGGTTAGCTCGTCCAATGGCACTGAAATCTCCGTATCTCCCAATAGGCTGGTCTTCAAGAAAAAATATGAGAAACGGAAATTCAGTTTGACGTTCAAGTCTCAAATGGAGAAGGAGTATGCTGTGGCTTTTGGTGCACTCGAATGGGTTGAAGAAACGGGAAGGCATGTTGTTAGGAGTCCCCTTGTGGTGGTACCTAGGAACACTGTCTTCAACTTCCAAAGTGGAGTTTAA 2256 0.504 MNIIILSIWCLLPVLCLCNSRATYIVHMDKSHMPKVFTSQRHWYSSTLTSLDSATPILYSYDNALHGFSVALSPHQLETLKQTPGFISAYRDRATTLDTTQSYSFLSLNHSHGLWPASNYAQNVVVGVIDSGIWPESESFKDDGMPTQTPPKWKGGCQGGESFDPSLCNSKLIGARYFNKGLLAAHDATKIGANSVRDIVGHGTHTASTVAGNYVNGASYFGYAKGTARGIAPRAKIAIYKVAWAQGVYASDILAGLDQAIADGVDVISISMGFDMVPLYEDPVAIAAFSALEKGVVVSASAGNAGPLLGSLHNGIPWVLTVGASNTERFFGGTLILGNGKRFSGWTLFPASATVNDLPLVYHNNASACDSSKLLSQVARGSIVICDSLMDVNQQIEHVSLSQVYGAVFISSDPRLFELGKMTCPGVVISPQDGENVIKYARGTRRASATIKFQETYVGTKRAPTVASYSSRGPSWECPWVLKPDLMAPGSSILAAWVPNLPAAQIGPNLLLNNEYNLLSGTSMACPHASGVVALLKNAHPEWSASAVRSALTTTASPLDNTGKPIEENGEWPQRASPLAMGAGLIDPNRALDPGLVYDATPQDYVNLLCAMNFTQAQIMAITRSKAYNCSSPSYDLNYPSFVAFYANNKSVKVETKFRRSVTYVGDGPAAYTARVSSSNGTEISVSPNRLVFKKKYEKRKFSLTFKSQMEKEYAVAFGALEWVEETGRHVVRSPLVVVPRNTVFNFQSGV 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03857 751 CDD Peptidases_S8_3 96 557 IPR034197 -
Pumo5g03857 751 FunFam Subtilisin-like protease SBT1.5 123 334 - -
Pumo5g03857 751 Pfam Subtilase family 122 560 IPR000209 GO:0006508|GO:0008236
Pumo5g03857 751 Pfam Fibronectin type-III domain 636 738 IPR041469 -
Pumo5g03857 751 SUPERFAMILY Subtilisin-like 102 596 IPR036852 GO:0004252|GO:0006508
Pumo5g03857 751 ProSiteProfiles Serine proteases, subtilase domain profile. 102 592 - -
Pumo5g03857 751 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 24 738 IPR045051 -
Pumo5g03857 751 CDD PA_subtilisin_like 334 451 - -
Pumo5g03857 751 Gene3D Peptidase S8/S53 domain 123 605 IPR036852 GO:0004252|GO:0006508
Pumo5g03857 751 PRINTS Subtilisin serine protease family (S8) signature 198 211 IPR015500 -
Pumo5g03857 751 PRINTS Subtilisin serine protease family (S8) signature 520 536 IPR015500 -
Pumo5g03857 751 PRINTS Subtilisin serine protease family (S8) signature 121 140 IPR015500 -
Pumo5g03857 751 FunFam Subtilisin-like protease SBT1.9 16 98 - -
Pumo5g03857 751 Pfam Peptidase inhibitor I9 23 96 IPR010259 -
Pumo5g03857 751 ProSitePatterns Serine proteases, subtilase family, serine active site. 521 531 IPR023828 -
Pumo5g03857 751 Gene3D - 328 458 - -
Pumo5g03857 751 Gene3D - 609 740 - -
Pumo5g03857 751 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 98 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03857 Pumo-Chr5 88642085 88644556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03857 1 738 Subtilisin-like Serine Gene Family AT5G67360 42.228 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03857 - - gmx:100791444 1295.03