Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03847 ATGGAATCCGAAGGAGCCAGTTCATCCATCTCAACGAGCTCGAAAATTATTGACAAATCAATGGTTGACGACAAAGAAACAAAAATTTCAGCACTGATTGTGGATGATGACGCTATCATTCGCAAAATCCACAAGACCATGCTCAAGCGCTTATTTAACATAGAAGCAAAAACGGTTAAGGATGGAAAGGAAGCAGTGGATCTGCATCGTTCTGGGGCAAATTTTGACATAATTTTCATGGACAAAGAAATGCCTATCATGGATGGTCATGAGGCAACAAAACATTTACGTGCTATGGGTGTGAAGAGCATCATTGTGGGAATCACTACCCGTGCTGATGGAAAAGATAAAGAGGAATTTCTAGCTGCTGGATCGAACCATTGCTTTGAGAAGCCTCTTGACCATGCAAAGGTTGAACAAGTCTTGCAAGAGCTAGCATGA 441 0.4172 MESEGASSSISTSSKIIDKSMVDDKETKISALIVDDDAIIRKIHKTMLKRLFNIEAKTVKDGKEAVDLHRSGANFDIIFMDKEMPIMDGHEATKHLRAMGVKSIIVGITTRADGKDKEEFLAAGSNHCFEKPLDHAKVEQVLQELA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03847 146 SUPERFAMILY CheY-like 28 145 IPR011006 -
Pumo5g03847 146 Gene3D - 9 146 - -
Pumo5g03847 146 ProSiteProfiles Response regulatory domain profile. 30 146 IPR001789 GO:0000160
Pumo5g03847 146 SMART REC_2 29 142 IPR001789 GO:0000160
Pumo5g03847 146 CDD REC_hyHK_CKI1_RcsC-like 32 142 - -
Pumo5g03847 146 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 145 - -
Pumo5g03847 146 Pfam Response regulator receiver domain 32 142 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03847 Pumo-Chr5 88478038 88478609 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03847 22 145 Response Regulator Gene Family AT3G04280 47.619 2.02e-32 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo5g03847 Response_reg 3e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03847 - - gmx:102665311 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03847 5 88478038 88478609 Pumo5g03847 5 88478038 88478609 ECH