Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03833 ATGTTTTGTGCTGATGGCATAACTAATCAGCACAAGACCGTCCATAAGCACAGCAGAGCAGTGGTGGACCAACACAGTTCACACCTCTTCTTACCCCGTAAGAAACCCCGAACTGGGTTTTTCCATAAACGACGCCGCACCGCCACCAACTGTGAACCACGCCAAAGAAGGAACGATGGACATGTCAACCACGCGCAGGCCAAGGGGCCGCCCACTGGGCTCGAAGAACAAGCCCAACCGCCCGCATTTGTGGCCCAAGACACCCCCAACAACGTTCTCCAAAGCCTCGTCATGGAGATAGCAAGCGGAGCCGACATTGCCGATAGCTTGATTCAGTTCGCGAGAAGGCGGCAGCGAGGTGTCTGCGTCCTGAGCGCCACCGGCGCCGTCGTGAACATCACCCTCCGGCAACCGACGGCCCCCGGCGCCTGTCATGGTACTCCATGGGCGGTTCGAGATTTTATCGTTGAGCGGTTCGTTTCTGCCAGGAGCGGCACCACCGAGTTTAACCGTTTACGTGGCGGGTGGCGAGGGACAAGTTGTTGGGGGCGGAGTGGTGGGCCCACTGGTGGCAGCAGGAACGGTTATGGTAATGGTGGCTGCGTTTTCCAATGCTGTGTACGAGAGATTACCCATTGA 639 0.5775 MFCADGITNQHKTVHKHSRAVVDQHSSHLFLPRKKPRTGFFHKRRRTATNCEPRQRRNDGHVNHAQAKGPPTGLEEQAQPPAFVAQDTPNNVLQSLVMEIASGADIADSLIQFARRRQRGVCVLSATGAVVNITLRQPTAPGACHGTPWAVRDFIVERFVSARSGTTEFNRLRGGWRGTSCWGRSGGPTGGSRNGYGNGGCVFQCCVREITH 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03833 212 MobiDBLite consensus disorder prediction 51 77 - -
Pumo5g03833 212 SUPERFAMILY AF0104/ALDC/Ptd012-like 92 144 - -
Pumo5g03833 212 CDD DUF296 97 138 IPR005175 -
Pumo5g03833 212 Pfam Plants and Prokaryotes Conserved (PCC) domain 96 134 IPR005175 -
Pumo5g03833 212 Gene3D - 94 175 - -
Pumo5g03833 212 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 50 145 IPR014476 GO:0003680
Pumo5g03833 212 ProSiteProfiles PPC domain profile profile. 90 212 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03833 Pumo-Chr5 88278914 88285587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03833 68 144 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 53.247 1.21e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03833 - - dcr:108200218 108.612