Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03828 ATGTACAGAGGAGAAGCAGCTCTGAAGAAAGAAGAATACCAAGTGTTGGAAGAAATCGGGCGAGGCCGTTTCGGCACGGTGTTCCGCTGCTTCCACCGCACTTCCAACAAATTCTACGCCGCCAAACTCATCGACAAGCGCCTCCTCACTGACTCCACCGACCACCACTGCCTCGAAATCGAGGCCAAGGCCATGACCTTCCTCTCTCCCCACCCTAACATTCTCCAAATCATAGACGCCTTCGAAGACGCCGATGCCTCCTCCATCGTGCTCCAGCTCTGCCAGCCGCGCTCCCTCTTCGACTGCATAGCCGACGGCCCCTTGCCGGAGCCCCACGCCGCCTCCCTCATGAAACAGCTTCTGGAAGCCGTCGCGCACTGCCACGCTCTCGGACTGGCCCACAGGGACATCAAGCCCGACAACCTCCTCTTCGATGAAGGGAACAACCTTAGGCTATCTGACTTCGGGTCCGCGGAGTGGTTCGGTGAGGGGAGGACCATGAGCGGCTTGGTGGGCACGCCCTATTACGTGGCCCCGGAAGTGATCATGGGGAGAGAGTACGATGAGAAAGTGGATGTTTGGAGCAGTGGGGTGATTCTTTACGCAATGCTGGCTGGGTTTCCACCCTTTTATGGAGACTCTGCCGCTGAGATTTTTGAGGCTGTTCTAAGGGCCAATCTTAGGTTCCCCACAAGAATTTTTAGGTCTGTGTCTGCCCCTGCTAAGGACCTCCTCAGGAACATGATTTCTAGGGATCCCTCTAGGCGCATATCCGCACACCAAGCATTGAGACACCCGTGGGTTTTGAGTGGTGATCTATCTTGA 825 0.5612 MYRGEAALKKEEYQVLEEIGRGRFGTVFRCFHRTSNKFYAAKLIDKRLLTDSTDHHCLEIEAKAMTFLSPHPNILQIIDAFEDADASSIVLQLCQPRSLFDCIADGPLPEPHAASLMKQLLEAVAHCHALGLAHRDIKPDNLLFDEGNNLRLSDFGSAEWFGEGRTMSGLVGTPYYVAPEVIMGREYDEKVDVWSSGVILYAMLAGFPPFYGDSAAEIFEAVLRANLRFPTRIFRSVSAPAKDLLRNMISRDPSRRISAHQALRHPWVLSGDLS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03828 274 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Pumo5g03828 274 Gene3D Transferase(Phosphotransferase) domain 1 5 273 - -
Pumo5g03828 274 SMART serkin_6 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g03828 274 ProSiteProfiles Protein kinase domain profile. 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g03828 274 CDD STKc_CAMK 13 267 - -
Pumo5g03828 274 Pfam Protein kinase domain 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g03828 274 PANTHER SERINE/THREONINE-PROTEIN KINASE 8 268 - -
Pumo5g03828 274 PIRSF ILK 4 264 - -
Pumo5g03828 274 SUPERFAMILY Protein kinase-like (PK-like) 10 270 IPR011009 -
Pumo5g03828 274 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Pumo5g03828 274 FunFam Maternal embryonic leucine zipper kinase 5 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03828 Pumo-Chr5 88238738 88239917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03828 10 267 EF-hand Containing Proteins AT2G38910 43.511 4.82e-71 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pumo5g03828 Pkinase 2.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03828 - K08794 gmx:547573 459.144