LGRPv2

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Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo5g03805	ATGGGGACTCCAGTGAATATTATTGTGGGTTCTCATGTCTGGGTTGAAGATCCACAAGTATGTTGGATTGATGGACAGGTATCAAAACTCAAAGGAAAGGATGCTGAAATTGAAGCAACCAATGGAAAGAAGGTTGTCACAAAGTTATCAAAAATATATCCCAAGGATACAGAAGCTCCTGCGGGTGGAGTAGATGATATGACTAAGCTTCACTATTTGCATGAGCCTGGAGTCCTGCAGAACTTAAAAACTAGATATGAATTGAATGAAATATATACTTATACTGGAAATATTCTGATTGCAATAAATCCATTCCAAAGACTACCTCATATTTATGATTCGCACATGATGCAACAATACAAGGGAGCACCATTTGGAGAGTTAAGCCCTCATGTATTTGCAGTTGCTGATGTTGCATATAGGGCAATGGTTCACGACGGGAAAAGCAATTCAATTTTGGTCAGTGGAGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTTATGCGATACCTTGCTTTCTTAGGAGGTAGGGCTGCCACTGAAGGACGAACCGTTGAACAACAAGTTCTTGAATCAAATCCAGTTCTGGAAGCATTTGGCAATGCTAAAACTGTCAGGAATAACAATTCCAGTCGTTTTGGTAAATTTGTTGAGATCCAATTTGATAAGAGTGGAAGAATCTCAGGAGCTGCCATTCGAACATACCTTCTAGAGAGATCTCGGGTTTGCCAGATTAATGATCCTGAACGCAACTACCACTGCTTTTATTTTCTTTGTGCTGCACCACAGGAGGAAATTGAGAAATACAAATTAGGAAATCCTAAAACGTTTCATTACCTTAACCAGTCAAAATGCTATGAACTGGATGATATAAGTGATTCCCGCGAGTATCTTGCTACCAGGAGAGCTATGGATATTGTCGGAATAAGCCAAAAAGAGCAGGAAGCAATTTTCAGAGTTGTTGCTGCAATTCTTCATATTGGGAATATTGATTTTGCCAAAGGAAGGGAAATTGATTCATCAATTCCAAAAGATGACAAATCCAAATTCCACTTAAAAACAACTTCTGAGCTTCTTATGTGCGATGCTGGTGCCTTGGAAGATGCATTATGTAAGCGTGTCATGATCACCCCTGAAGAAGTTATAAAACGGAGCCTTGATCCTGAAAGTGCAGCAGTCAGCAGAGATGGCTTGGCAAAAACAATTTATTCTAGGCTCTTTGACTGGTTGGTGAACAAGATTAATAATTCAATCGGACAAGACTCCAATTCTAAATCTTTGATTGGGGTGCTTGATATCTATGGTTTTGAAAGCTTTAAATCTAACAGTTTTGAGCAGTTCTGCATTAATTTTACAAATGAGAAGTTGCAGCAACATTTCAATCAGCACGTGTTTAAGATGGAACAAGAAGAATACACAAAGGAGAAGATCAATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTGGACCTTATTGAAAAGAAACCTGGAGGAATAATTACACTCCTTGACGAAGCTTGCATGTTTCCAAAGTCTACACACGAAACATTTTCAAACAAGCTTTATCAAACATTTAAGAATCACAAGCGCTTCATTAAGCCAAAATTGTCTCGAACAGATTTCATTATTTCTCATTATGCTGGCGAGGTGCAGTACCAGTCTGACCAATTTTTAGACAAAAACAAGGATTATGTGGTTCCTGAACATCAAGATTTATTGAGTGCTTCCAAATGTCCTTTTGTAGCAGGCCTTTTTCCTCCACTTCCAGAAGAGACATCCAAGTCTTCAAAATTTTCTTCAATTGGTTCTCGATTTAAGCTGCAACTACAGCAATTAATGGAAACACTAAGCTCTACAGAGCCTCATTACATTAGATGTGTTAAACCAAACAACCTCCTCAAGCCTGCAATTTTTGAGAATGCAAATATTATGCAACAACTTCGCTGTGGTGGTGTTTTAGAAGCAATCAGAATCAGTTGTGCTGGCTACCCTACTCGCCGTGCTTTCTTTGAATTTGTAAACCGATTTTCCCATCTTGCTCCAGAGTTCACAGAAGCACACCATGATGAGAAGACTGTTTGCCAAAAGATTCTGGAAAAAGTAGGGCTTAAAGGATATCAGATTGGAAAAACAAAGGTATTCCTAAGAGCAGGTCAGATGGCTGAACTAGATGCACGGAGAGCTCAAGTACTCAGTAGAGCAGCAAAAATTATCCAACGGCGTATACGAACCCATCAAGCTCGTAAACATTATCTTGCACTACGAAAGAAGACTATATATGTGCAGTCTCTGTGGAGAGGAAGACTTGCACTCAAACTTTATCAGAACAAGAGAAGGGAGGCAGCTGCTGTGAAAATTCAGAAGAACATACGCAGATATGAAGCTAGGAAAACCTATATTAAACTCCAAGCATCAGTACTTACTTTGCAAACAGCTTTAAGGGCAATTGCTTCCCTCAAGGAGTTCAGATTTAGGAAACAGACTAAAGCTTCCATCATTATTCAGGCTCGGTGGCGGTGCCACAAAGCTGCGTCATATTATAAGAAGCTCAAGAAAGGTGCAATTGTCACACAATGCCGATGGAGGGGGCGCATGGGCAGGAAAGAACTTAGGAAACTGAAAATGGCTGCAAGAGAAACTGGCGCACTTAAAGATGCAAAGGACAAGCTTGAAAAAAGAGTGGAGGAACTCACTTGGCGTCTTCAACTAGAGAAAAGTTTAAGGACCAACCTCGAAGAATCCAAAGCACAAGAGATAGCAAAACTGAAGAATTCACTGCAGGAGATGCAGAACAAAGTTGATGAAAGCAATGCATTGCTTATAAAGGAGAGAGAGAATGCAAAGAAAGCTATTGAAGAAGCACCTCCTGTTGTTAAAGAAACTAAGGTTATTGTTGAAGACACTCAGAAGATTGAATTGCTAACAATGGAAGTTGAGAGTCTAAAGACATCCCTTGAGTCAGAGAAACAGAAAGCTGACGAGAAATATAATGAAGCCAAAGCTTGTAGTGAAGAAAGGGGAAAAAAATTAGAAGACACAGAGAAGAAGTTTCGTCAGCTCCAAGAATCCTTGACCAGGCTAGAAGAGAAGATTACTAATTTAGAATCAGAGAATCAAGTTCTACGTCAACAAGCCCTGTCCATGGCACCTAATAAGTTCCTCTCAGGACGCTCTAGATCAATTATTCAGAGAACTGACAGTGGACATTTTGGAGCGGAAGCAAAGACAACTTTGGATATGCATAGCACATCAATGAACCACAGGGAATCCTCTGAAGTGGAGGATAAACCGCAGAAGTCACTAAATGAGAAACAACTGGAGAGCCAAGAGTTACTCATTAAATGCATTGGACAACACCTAGGCTTTGCTGGGAATAGACCAATTGCTGCTTGTATCATATACAAATGCCTCTTGCATTGGAGATCATTTGAAGTTGACCGTACTAGCGTTTTTGATCGTATAATTCAAACTATTGGTCATGCAATTGAGACCCAGGATAACAATGATGTCTTGGCTTATTGGTTATGCAACACCTCTACACTTGTCTTGTTACTCCAGCGCACACTTAAGGCAAGTGGTGCTGCTGGAATGGCTCCTCAACGCCGTCGTTCTTCATCAGGGACCCTGTTTGGGCGGATGACACATAGTTTCCGTGGAACTCCAGCAGGAGTCAATCTTTCCCTAATCAATGGTAGCATGAGCGGTGGTGTAGATTCATCAAGACAAGTTGAAGCCAAATACCCTGCTCTGCTTTTCAAACAGCAGCTTACAGCTTATGTGGAAAAGATATATGGAATGATTCGAGATAACTTGAAGAAAGAAATTTCTCCCTTGCTTGGATTATGCATCCAGGCACCCAGAACATCCAGAGCGAGCTTGGTTAAGGGAGCATCACGTTCAGTTGCGAATACTGAAGCCCAGAAAGCTTTGATTGGTCACTGGCAGGGGATAGTCAAGGGACTTGCGAACTTCTTAAATACTTTGAAAGAAAATCATGTTCCCCCATTTTTGGTTCGTAAGGTGTTCACTCAAATGTTTTCTTTCATCAATGTCCAACTTTTCAATAGTCTTCTTCTAAGACGTGAGTGCTGCTCTTTTAGTAATGGAGAATATGTGAAATCTGGTTTGGCTGAATTGGAGGATTGGTGTTATAATGCCACTGCTGAGTACGCTGGTTCAGCTTGGGATGAGCTCAAACATATAAGACAGGCTATTGGATTTTTGGTCATACATCAGAAACCAAGGAAAGCGCTGAATGAAATAACTAATGAGCTGTGCCCAGTCCTCAGTATACAGCAGCTATATCGGATTAGCACCATGTACTGGGATGACAAGTATGGCACACATAGCGTATCCCCTGATGTCATATCTAATATGAGAGTGTTGATGACTGAAGATTCAAATCATGCAGTTAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCGTTTTCTGTTGATGACTTATCGAAGTCGAAGGATCAGATAGATATAGCTGATATAGAGCCCCCTCCACTAATACGTGAAAACACTGGCTTTAGTTTTTTGTTGCCACTCTCAGACTGA	4581	0.4045	MGTPVNIIVGSHVWVEDPQVCWIDGQVSKLKGKDAEIEATNGKKVVTKLSKIYPKDTEAPAGGVDDMTKLHYLHEPGVLQNLKTRYELNEIYTYTGNILIAINPFQRLPHIYDSHMMQQYKGAPFGELSPHVFAVADVAYRAMVHDGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYFLCAAPQEEIEKYKLGNPKTFHYLNQSKCYELDDISDSREYLATRRAMDIVGISQKEQEAIFRVVAAILHIGNIDFAKGREIDSSIPKDDKSKFHLKTTSELLMCDAGALEDALCKRVMITPEEVIKRSLDPESAAVSRDGLAKTIYSRLFDWLVNKINNSIGQDSNSKSLIGVLDIYGFESFKSNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEKINWSYIEFVDNQDVLDLIEKKPGGIITLLDEACMFPKSTHETFSNKLYQTFKNHKRFIKPKLSRTDFIISHYAGEVQYQSDQFLDKNKDYVVPEHQDLLSASKCPFVAGLFPPLPEETSKSSKFSSIGSRFKLQLQQLMETLSSTEPHYIRCVKPNNLLKPAIFENANIMQQLRCGGVLEAIRISCAGYPTRRAFFEFVNRFSHLAPEFTEAHHDEKTVCQKILEKVGLKGYQIGKTKVFLRAGQMAELDARRAQVLSRAAKIIQRRIRTHQARKHYLALRKKTIYVQSLWRGRLALKLYQNKRREAAAVKIQKNIRRYEARKTYIKLQASVLTLQTALRAIASLKEFRFRKQTKASIIIQARWRCHKAASYYKKLKKGAIVTQCRWRGRMGRKELRKLKMAARETGALKDAKDKLEKRVEELTWRLQLEKSLRTNLEESKAQEIAKLKNSLQEMQNKVDESNALLIKERENAKKAIEEAPPVVKETKVIVEDTQKIELLTMEVESLKTSLESEKQKADEKYNEAKACSEERGKKLEDTEKKFRQLQESLTRLEEKITNLESENQVLRQQALSMAPNKFLSGRSRSIIQRTDSGHFGAEAKTTLDMHSTSMNHRESSEVEDKPQKSLNEKQLESQELLIKCIGQHLGFAGNRPIAACIIYKCLLHWRSFEVDRTSVFDRIIQTIGHAIETQDNNDVLAYWLCNTSTLVLLLQRTLKASGAAGMAPQRRRSSSGTLFGRMTHSFRGTPAGVNLSLINGSMSGGVDSSRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGASRSVANTEAQKALIGHWQGIVKGLANFLNTLKENHVPPFLVRKVFTQMFSFINVQLFNSLLLRRECCSFSNGEYVKSGLAELEDWCYNATAEYAGSAWDELKHIRQAIGFLVIHQKPRKALNEITNELCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNHAVSNSFLLDDDSSIPFSVDDLSKSKDQIDIADIEPPPLIRENTGFSFLLPLSD	1526

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo5g03805	1526	ProSiteProfiles	Myosin N-terminal SH3-like domain profile.	8	57	IPR004009	GO:0003774\|GO:0005524\|GO:0016459
	Pumo5g03805	1526	PRINTS	Myosin heavy chain signature	429	457	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Pumo5g03805	1526	PRINTS	Myosin heavy chain signature	92	111	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Pumo5g03805	1526	PRINTS	Myosin heavy chain signature	482	510	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Pumo5g03805	1526	PRINTS	Myosin heavy chain signature	149	174	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Pumo5g03805	1526	PRINTS	Myosin heavy chain signature	196	223	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Pumo5g03805	1526	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	37	785	IPR027417	-
	Pumo5g03805	1526	SMART	MYSc_2a	56	733	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Pumo5g03805	1526	Pfam	DIL domain	1345	1448	IPR002710	-
	Pumo5g03805	1526	Pfam	Myosin N-terminal SH3-like domain	9	51	IPR004009	GO:0003774\|GO:0005524\|GO:0016459

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo5g03805	Pumo-Chr5	88018613	88031340	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo5g03805	1	1526	Myosins gene family	AT1G54560	81.765	0.0	2650

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo5g03805	K10357		-	gmx:100816792	2692.15

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo5g03805	5	88018613	88031340	Pumo5g03805	5	88018613	88031340	ECH
	Pumo5g03805	5	88018613	88031340	Pumo3g02528	3	38223572	38230021	PCT

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