LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo5g03791	ATGCAATCCAGTGCAAAAGGTCTCTTGCTTTATCTTGTTTGTGTATTTGTTTTGTTGAATGGCATTCATGGTGCATGGAATGAGGAGCCAGGTTCTTTGATTTTGGGTTGTGGGTTGGATGGAGGGGGTGCCAATGATGCTGATGGAAGACAATGGAGTCCTGATGACAAGTTCCTTGGGTCAGAAGGTAATTCAATCACATCCAAAGCCTCTTACCAAGACCCTTCCCTTATGTCTGAGGTTCCATACATGTCAGCACGTATTATCACATCTGAGACAAGATACAAATTCCCCGTTGAACCTGATAAGCGCTATTGGCTCAGGCTCCACTTTTACCCCTCTATTTATGGCAGTTTCAGTCCCGCTGACTCATTTTTCTCCGTGACTGCAAATGAGGTTACCCTCCTCTCCAATTTCAGCGCCTTAATCACTTGTGAGGCCCTCTCACAAGCCTACATTGATAGAGAGTACTCCCTTGCACCTTTGAATTCAGATACCTTGACTCTCACTTTCAAGCCTTCTGATAAATACAATGGCGCCTTCGCTTTTGTCAATGGCATTCAGCTGATCCCAATGCCCGAGTTGTTTGATTCTGGAGCATTGGTAGGGTATGCTGACCAAACCACGGATGTGAAGAGCTTGAATTTGCAAACCATGTTTAGACTAAACGTTGGTGGACAGTACATATCTCCAACCCAAGACTCTGGCCTTACAAGGATGTGGTATGATGACACACCTTACCTTTATGGTGCAGCCACTGGTGTGACCAACCAAGCTGAGAAGAATGTCCCAATCGACTACCAGAACATGCCAAAGTACATTGCTCCATCTGATGTCTACTCCACATCAAGATCAATGGGGAATGATAAGGATGTCAATATGGCCTACAATCTCACATGGATCTTCCAAGTTGATCCCAATTCCATGTACCTTGCAAGGTTGCATTTCTGTGATTACTATTACTCCAAGGTCAATGAGATTGTTTTCGACATATTTGTCAACAACCAAACGGCAGAAGCTCAAGCTGATGTGATAGGGTGGACAGGAGGTAAGGGAGTGCCAACTTATAAGGACTATGTGTTATATGTCCAAGATGGGGAGGGTGATGAGATGCTTTGGCTGGCTCTTCACCCTGCACCTGGCACGAAGCCCGAGTACTATGATGCCATACTCAATGGAGTGGAAATATTCAAGCTCAATGACACAGACTTGTCTGGTCCCAATCCTCAGCCTTCGGACATGCTCCTCAAGCAGCAGAAAGATGAGGAAGCAGGTTTCACTAGCCACAAAGCATATCATAAGCATGCTGTTATTGGTGGAGCTGCTGGAGGTGCTGCTGGTGTTGCTTTCATGGCTGCAATATTCGTTGCTGTGTACAACAAGAAGAAGAGAGTTCCAGGGTCAGAGGGTCACACAAGCTGGCTTCCCATCTATTTGAACTCACACAACAGCAAATCCTCTACGTCTGGGAAGAGCGTTTGCAGTGCCAACTTAACTGCCATGGCTCAAGGTCTTTGCCGCTATTTCTCCTTGCAAGAGATAAAGCAAGCAACGAAGAATTTTGATGAGTCCAACGTCATTGGGGTTGGTGGATTTGGAAAGGTGTACAAGGGTGTCATTGATAATGGAATGAAGGTGGCCATCAAGAGGTCGAACCCGCAGTCAGAACAAGGAGTTAATGAATTCCAAACGGAGATTGAGATGCTTTCCAAGTTGAGACACAAGCATTTGGTGTCCTTGATTGGGTTCTGCGAGGAAAATGATGAGATGTGCCTGGTTTATGACTACATGGCTCTTGGCACCATGAGGGAGCATCTTTACAAGGGCAACAAGCCTCTGTCTACTCTATCATGGAAGCAAAGGTTGGAGATTTGCATTGGAGCTGCAAGAGGGCTTCACTACCTTCACACTGGGGCTAAGTACACCATCATTCATAGAGATGTCAAAACAACAAACATTCTCTTGGATGAAAACTGGAGTGCCAAGGTTTCAGATTTTGGCTTGTCAAAAACGGGTCCAAATATGAACGAAGGTCATGTTAGTACTGTGGTGAAGGGTAGTTTTGGCTACTTGGATCCTGAATACTTCAGGAGGCAACAGTTGACTGAAAAATCTGATGTCTACTCATTTGGGGTTGTTCTGTTTGAAGCCCTGTGTGCCAGGCCTGTTCTCAATCCTAACCTTCCAAAGGAACAGGTTAGTCTTGCTGATTGGGCATTGCTTTGCAAGGAGAAAGGAACTCTAGAGGATATCATTGACCCGTGTCTCAAGGGAAAGATCAATCCAGAAAGCTTGAATAAGTTTGTAGACACAGCTGAAAAGTGCTTGTCTGATCATGGTACTGACCGTCCCTCCATGAATGATCTCTTGTGGAATCTCGAATTTGCTCTCAACCTGCAAGAAAATGTTGAAGGTGGTGGTTCCACTCATTCTTCTCGTGCTGAGGAAAGTGAGTTTGAAGACATAAGCTTGGGAGACAACGACATAGCACGCCACTATAAAAACTTGAGCCTTGGAAGTGAGCATGACCTTAGCGATTCTAGTGAGAATTCGAATGCCGTCTTCTCAGAACTTGTCAATCCAAAAGGACGATGA	2595	0.4524	MQSSAKGLLLYLVCVFVLLNGIHGAWNEEPGSLILGCGLDGGGANDADGRQWSPDDKFLGSEGNSITSKASYQDPSLMSEVPYMSARIITSETRYKFPVEPDKRYWLRLHFYPSIYGSFSPADSFFSVTANEVTLLSNFSALITCEALSQAYIDREYSLAPLNSDTLTLTFKPSDKYNGAFAFVNGIQLIPMPELFDSGALVGYADQTTDVKSLNLQTMFRLNVGGQYISPTQDSGLTRMWYDDTPYLYGAATGVTNQAEKNVPIDYQNMPKYIAPSDVYSTSRSMGNDKDVNMAYNLTWIFQVDPNSMYLARLHFCDYYYSKVNEIVFDIFVNNQTAEAQADVIGWTGGKGVPTYKDYVLYVQDGEGDEMLWLALHPAPGTKPEYYDAILNGVEIFKLNDTDLSGPNPQPSDMLLKQQKDEEAGFTSHKAYHKHAVIGGAAGGAAGVAFMAAIFVAVYNKKKRVPGSEGHTSWLPIYLNSHNSKSSTSGKSVCSANLTAMAQGLCRYFSLQEIKQATKNFDESNVIGVGGFGKVYKGVIDNGMKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEENDEMCLVYDYMALGTMREHLYKGNKPLSTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWSAKVSDFGLSKTGPNMNEGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPVLNPNLPKEQVSLADWALLCKEKGTLEDIIDPCLKGKINPESLNKFVDTAEKCLSDHGTDRPSMNDLLWNLEFALNLQENVEGGGSTHSSRAEESEFEDISLGDNDIARHYKNLSLGSEHDLSDSSENSNAVFSELVNPKGR	864

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo5g03791	864	MobiDBLite	consensus disorder prediction	841	857	-	-
	Pumo5g03791	864	FunFam	FERONIA receptor-like kinase	32	193	-	-
	Pumo5g03791	864	Gene3D	Phosphorylase Kinase; domain 1	481	596	-	-
	Pumo5g03791	864	PANTHER	OS07G0166700 PROTEIN	505	800	IPR045272	GO:0004714\|GO:0006468
	Pumo5g03791	864	FunFam	Receptor-like protein kinase FERONIA	597	814	-	-
	Pumo5g03791	864	ProSitePatterns	Protein kinases ATP-binding region signature.	527	549	IPR017441	GO:0005524
	Pumo5g03791	864	MobiDBLite	consensus disorder prediction	841	864	-	-
	Pumo5g03791	864	FunFam	receptor-like protein kinase FERONIA	482	596	-	-
	Pumo5g03791	864	Pfam	Malectin-like domain	36	398	IPR024788	-
	Pumo5g03791	864	SMART	serkin_6	521	796	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo5g03791	864	CDD	STKc_IRAK	527	794	-	-
	Pumo5g03791	864	FunFam	FERONIA receptor-like kinase	214	400	-	-
	Pumo5g03791	864	SUPERFAMILY	Protein kinase-like (PK-like)	499	796	IPR011009	-
	Pumo5g03791	864	Gene3D	Transferase(Phosphotransferase) domain 1	597	812	-	-
	Pumo5g03791	864	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	643	655	IPR008271	GO:0004672\|GO:0006468
	Pumo5g03791	864	ProSiteProfiles	Protein kinase domain profile.	521	796	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo5g03791	864	Gene3D	-	214	400	-	-
	Pumo5g03791	864	Gene3D	-	36	192	-	-
	Pumo5g03791	864	Pfam	Protein tyrosine and serine/threonine kinase	525	790	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo5g03791	Pumo-Chr5	87878205	87880799	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo5g03791	33	864	Receptor kinase-like Gene Family	AT3G51550	53.793	0.0	847

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Pumo5g03791		Malectin_like	2.4e-34	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo5g03791	-		-	gmx:102659961	1546.18