Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03768 ATGGGGAAGGCCAGCAAATGGATCAGAAACTTCCTTCTAGGGAAAAAAGAAGAGAAAATCAAGAAGATCGAAGCATTCTCCGCGGAGGATAAGAGTGCCAACACGGGGAGTCTGATTGTGAGTCCCAAAGTGAAGCGCAGATGGAGCTTCGGAAAACTAACAGGAGGAAGAATCACAGGCAAGGTAGTAGGGCATAAATTTTCCAGATCTTTTGACTCAGGTGACTCTGCAAAACTGCAAATACAAACCTTGTTGGAAACCAAGACTCCAAGGCGTCTTCCAAAACCACTAGCAAAGGCTTCTAAAGATAAAAACAAAGCTGCTACAAAGATTCAGGCTAACTTTCGCTCGTATTTGGCAAGGAGAGCATTGCATGCTTTAAGGGGATTAGTCAAGTTACAGGCACTAGTGAGGGGTCATCTTGTGAGGAAACAAACGACTGCTACACTGCGTGGCATGCATGCCTTGATGGCCATACAAGTTAGAGCCCGGATTCACAGAATTCAGATGGCAGAGGAAGCAAACCTCCCCGGAAAACAGCCTCCGCAACATAGACAAGTTCCACACTTCAGAGATCTAATAACAGAAGAAACTAAAGATTCAAACGATACGAGTGTGGAAGAAATGTTGGAGGTTTTGAAAAGCAGAAGTGGCCCACTAGATGGTTCATATGTTAAAGGCAAAGAGCGTGATTCCATGACATACTATTCGAAGCATGTGCCGTTTGTTTCTAAACGAGAAAACCAATACAAGAATACTCTAATCATAGAACCAAACAGCCTAGGAAACTACCGGGTCATGTCTGAATTTAACCCAGCGACAATTGCCTTGTCAACTTCTCAGCGCCATTCAGTGCCTCACCACCGCCAATCACTGTCACCAAATTACATGAACAAGACAGAATCTTCAAGGGCTAAGGCAAGGTCGCAGAGTGAACCAAAACAACGACCCAGACGGGGAATGAGGCACAAAGGCAAGTCTGTGGAATCCCCATTGAATGGTCCAAGACAAAATCTGTTCTCAAACTCGTTACGCTTCGATCATGGAAGCCTGGACCATTGGGTTATCAATCTTCATGGGTCAACCAACGACAGCAGGCGCAACTCCTTTGGCAGCAGCTCGGTTACTACAGATTCCTATTATTGA 1146 0.452 MGKASKWIRNFLLGKKEEKIKKIEAFSAEDKSANTGSLIVSPKVKRRWSFGKLTGGRITGKVVGHKFSRSFDSGDSAKLQIQTLLETKTPRRLPKPLAKASKDKNKAATKIQANFRSYLARRALHALRGLVKLQALVRGHLVRKQTTATLRGMHALMAIQVRARIHRIQMAEEANLPGKQPPQHRQVPHFRDLITEETKDSNDTSVEEMLEVLKSRSGPLDGSYVKGKERDSMTYYSKHVPFVSKRENQYKNTLIIEPNSLGNYRVMSEFNPATIALSTSQRHSVPHHRQSLSPNYMNKTESSRAKARSQSEPKQRPRRGMRHKGKSVESPLNGPRQNLFSNSLRFDHGSLDHWVINLHGSTNDSRRNSFGSSSVTTDSYY 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03768 381 ProSiteProfiles IQ motif profile. 128 155 IPR000048 GO:0005515
Pumo5g03768 381 Pfam IQ calmodulin-binding motif 106 124 IPR000048 GO:0005515
Pumo5g03768 381 Pfam IQ calmodulin-binding motif 131 145 IPR000048 GO:0005515
Pumo5g03768 381 PANTHER IQ-DOMAIN 5-RELATED 1 349 - -
Pumo5g03768 381 SMART iq_5 126 147 IPR000048 GO:0005515
Pumo5g03768 381 SMART iq_5 103 125 IPR000048 GO:0005515
Pumo5g03768 381 Gene3D - 101 155 - -
Pumo5g03768 381 MobiDBLite consensus disorder prediction 359 381 - -
Pumo5g03768 381 Pfam Protein of unknown function (DUF4005) 285 324 IPR025064 -
Pumo5g03768 381 MobiDBLite consensus disorder prediction 279 304 - -
Pumo5g03768 381 ProSiteProfiles IQ motif profile. 104 132 IPR000048 GO:0005515
Pumo5g03768 381 MobiDBLite consensus disorder prediction 279 341 - -
Pumo5g03768 381 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 146 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03768 Pumo-Chr5 87622213 87623697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03768 1 317 IQD Protein Family AT4G14750 33.956 6.97e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03768 - - gmx:100527816 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03768 5 87622213 87623697 Pumo5g03768 5 87622213 87623697 ECH