Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03748 ATGGCTTCATCATCACCTCCTTATTCTCTAATGTTTACAGTGCGGAGGTGCCAACCTGAGTTGGTGGCTCCTGCTATTCCCACTCCCCACGAACTTAAACCACTATCCGACATAGATGATCAAGAGGGCCTACGGATGCAGGTTCCAATGATTCAGATTTATCGTAACGAACCATCAATGGCAGGGAAAGACCCAGTTGAAGTGATTCGACAAGCACTGGCACAAACACTTGTCTTCTATTACCCATTTGCGGGTAGGCTTAGGGAGGGGCCTGATCGCAAATTGATGGTGGATTGTACTGGGGAGGGCGTCATCTTCATTGAGGCTGATGCTGACGTAACACTTGATCAGTTTGGTGACGCACTCCAACCTCCATTCCCATGCTTCCAACAACTGCTATATCATGCTCCAGGCTCCCAAGAAATTACTAACACTCCCCTTCTACTCGTTCAGGTCACACGACTCAAGTGTGGTGGTTTCATCGTGGGCTTCCGCTTCAACCACACCATTGGAGACGCAGGTGGCATATCACAGTTCATGAACGCTTGGTCTGAAATGGCTCGCGGTGCAAGCAAACCTTCCATTGCACCTGTGTGGCGTAGGGAGCTCCTAATGGCAAGAGATCCACCTCGCATCACATGCAACCATCGCGAATACGAACATGTCCCAGACACAAAGGAAGAGACCATCACTTTGCATGATAACGATATGGTTCTTCGATCATTCTTCTTTGGACCCACCGAAATAGCTGCCATTCGTCGCTTGGTTCCACACCACCTTCGTCAATGCTCCACGTTTGATGTCATCACAGCATGCTTCTGGCGTTGTCGCACAAAAGCATTGCAAATGGAGCAAGATGCGGAAGTTCGCATCATGTGCATCATCAACGCACGTGCTAGGTTCAATCCCCCGTTACCTATTGGTTATTACGGTAATGCTATTGCAATCCCCGCAGCAGTCACCACTGCTGGGAAGCTTTGTGGAAATCCATTTGGGTATGCAGTGGAGTTAATCAATAAACTGAAACATGAGGTAACAGAGGAATATATGCATTCTGTGGCAGATTTAATGGTGATTAAGGAACGGTGCTCATTCACACCCGTAAGGTCTTGTATTATTTCGGATTTGACACGTGCTAGGTTTAGAGAAGTGGATTTTGGGTGGGGTGGTGCTGTGTATGGTGGAGTGGCCCAAGGTGGGGCTGGGACCTTTCCTGCAGCAACCTATCATGTCTCCTATAAGAATGCAAAAGGTCAAGAAGGTACAGTGTTACCGATTTTGTTGCCTACCGAATCTATGAATAGGTTTGCGAAAGAGTTAGATGACATGCTTGGTAACCAAAACCAACCGACAGGAATTCGAAGTAGTCCTAGTTTTATTATCTCTAACTTATAG 1395 0.4731 MASSSPPYSLMFTVRRCQPELVAPAIPTPHELKPLSDIDDQEGLRMQVPMIQIYRNEPSMAGKDPVEVIRQALAQTLVFYYPFAGRLREGPDRKLMVDCTGEGVIFIEADADVTLDQFGDALQPPFPCFQQLLYHAPGSQEITNTPLLLVQVTRLKCGGFIVGFRFNHTIGDAGGISQFMNAWSEMARGASKPSIAPVWRRELLMARDPPRITCNHREYEHVPDTKEETITLHDNDMVLRSFFFGPTEIAAIRRLVPHHLRQCSTFDVITACFWRCRTKALQMEQDAEVRIMCIINARARFNPPLPIGYYGNAIAIPAAVTTAGKLCGNPFGYAVELINKLKHEVTEEYMHSVADLMVIKERCSFTPVRSCIISDLTRARFREVDFGWGGAVYGGVAQGGAGTFPAATYHVSYKNAKGQEGTVLPILLPTESMNRFAKELDDMLGNQNQPTGIRSSPSFIISNL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03748 464 Gene3D - 219 440 IPR023213 -
Pumo5g03748 464 PANTHER ACYL TRANSFERASE 4 11 444 - -
Pumo5g03748 464 Pfam Transferase family 17 442 - -
Pumo5g03748 464 Gene3D - 11 218 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03748 Pumo-Chr5 87410307 87413322 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03748 45 440 Monolignol Biosynthesis Gene Families AT5G48930 30.508 1.16e-49 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03748 K19861 - gmx:100792864 714.146