Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03713 ATGGAGTGCAACAGGGATGAGGCTATGAGGGCTAAGCAGATTGCTGAAAATAAGATGCAAGCTGGTGACTTTGAAGGGGGGCTGAAATTTGCTACGAAAGCCCAAAGGTTGTTTCCTGAGATTAAGAACATTGTTCAGATCATTGCTGTTTGTGAGGTTCACTGTGCTGCACAGAAGAAACACTTTGGGTCTGACATGGACTGGTATGGAATTCTTCAGACTGAAAAGTCCGCCGATGAAGCAACCATAAAGAAACAGTACAGGAAGCTTGCACTGCTACTTCATCCTGATAAAAATAAATCTGCTGGTGCAGAGGCTGCTTTCAAGTTGATTGTTGAAGCTAACAGAGTGTTGAGTGACCAAACGAAGCGTACTTCGTATGACTCGAAGTTTGGAGTTCCTGTGGGAAATACAGCAGCTAAGGTTCCACCTCGTCACCCAAATGGAAATGCTTTTGGGACGAGATGTGATGGAACTGCAAGAAATGATCAGAACAGTTTTTTTTCACAATACCAAGCTTGGAATGCATATCATCGGGCTGATAATCAGACATTCTGGACATGTTGCCCACATTGTAATACTAGATATCAATACGTCAAAACCATTTTAAATCATACCATACGCTGCCAACATTGTTTTAAATCCTTTACAGCTCATGATATGGGGAACCACAATGTGCCACCAGGATATTGGTCAACATTTAATAACCAGAAAGAGCCTCCAAAACATGCATCGTCAAAAGAAGCATCAAAAAACAATGGTGGAAAATCTTCTGGTAGAGAACAGGAGGGTGTATCCATGTCAAAATGCTCTGCTGGTATTAGTGCCCATTCTAAAGTTGCAAAGAGCAGAGATGGCCATGTAGCTGCAGGAGTGACAAAGGCTGGTGTTGGGACGTCCAACCCCACTAATTCCAAAGCCAAGGAATCACGAGCCTCAACAAAGGTTGGACGTAAGAGAGCAAGGCAGTCAGCATCAGATGATGATAACAAAGCTGGAAATGGTAAAGGCGTGAAAGATACCAAGGTTCAAGAAAATAGGGTTGATCCTAATAGGAGATCTTCAAGGAAAAAACAGCATGTTTTGTACACAGAAAATGATAAAGATGGTGATTTTGGGAGTTCTTCCAAAAGGCCACGGCACCATGAATCATTTACCAGCACTGAAATGGAGAAAAGAGAAGTGCCCGCAGCTGGTGTGGGTGGTAAGAATGGAGAGATAAGAAATAAAGCAAGTGCACCACCTGAAGAAACAGTTTTAAGGAATAAAACCAAAGTTGAGCAGACAAATGTGCAAAGAAAGGAGGCATCCAACTCAGATCTTAATGATAGAAAGTCAAAAGCTGACAATTGTTCTCCACCGAAGTCAAATTTACCTCCCAGTTCAGAGATTTGCTGTCCTGATCCAGATTTCAGTGATTTTGAGAGAGATAAGGCAGAGGATTGTTTTGCTGTTAATCAATTATGGGCTATTTTTGATAATACCGATAGTATGCCAAGATTCTATGCTCTTGTCAAGAAAGTGTACTCCCCTTTCAAGTTGCGGATTACTTGGCTGGAACCTGACTCAGATGACCAAGGTGAGATTGACTGGCATGAGGCAGGTTTACCCGTTGCTTGTGGTAAGTTCAAACTTGGTCATTCTCAGAGAACTTCAGATCGCTTTATGTTCTCTCATCAGATGCATTGCATAAAAGGAAGTGAAACTGGTACTTATCTGGTATATCCAAAGAAGGGAGAAACTTGGGCAATTTTCAGACATTGGGATCTTGGGTGGAGTTCTGATCCAGAAAAGCATTCAGAGTATCAATTTGAATATGTGGAAGTTCTATCTGATTTTGATGAAAATGTTGGCATTAAAGTTGCTTATCTTAGCAGACTGAAGGGGTTTGTTAGTCTCTTTCAGCGAACTGTGCTAAACAGAATTAGCTTTTTTTATATTTTGCCTAATGAGCTATATAAGTTGTCTCATCGGATTCCTTCATGTAAGATGACAGGTGCTGAAAGGCAAGATGTTCCAAGAGGATCTTTTGAACTTGATCCTGCTGGTCTGCCTAACAGTCTTTTTGAAGTTGGTGATCCTGGTGTTGTGAAGATGGATGGAGTCAATTGTTCGCACCATGAATACTCGAAGTGCAAAGTTGAAGAGGCAATGTCTAATGATAGTATTCACAAAGCAAAGTTGCGAGAGAGTATTGATTCTGAAAGAGTAGCACAAATCCTGAGAAGATCACCAAGGTCAAGTAAAAAAAGTACGGACAATGATCAAACAAGCACTAGTCAATATATAGTCAGAAAGGATGACATAAACATTGGCTACAGGGTTGACAGTCCACCTGAGGGAAACACTACTGCTTCTCAGACTAATGAGAGGAAGGTCAAGACACCTCAGAAACATGAGAAAAATAATAATGAAGGAGAAACATTGAAAGCTCGAAAGTCACCTAGGGATTTAAGCAAGAAAAATGCTCAAGGAGATGCAGGTGAATGGACAACAAGCAAGAAGACTGATAATCATTCAAGCAACAGCAAAAATGTGAAGGGCAGCAATATTCCTCAGTCGGTGGGAGCAACATGTTATGGCTTTAAGAAGGAAAAATCTAAAGAGATGTTTCAGTGTGGTCAGATATGGGCAATATATGGTGATAGGGATCATATGCCCGATACTTATGCTCAAATTAAGATAATTGAATGCACTCCTAATTTTAGATTGCAGGTGTCCGTGCTTGAACCCTGCTCACCACCAAATGACTTAAAAAGAACAATATCTTGTGGCACCTTTGAAGTTAAAAAAGCCAAATTACAGATTCTTTCTCTCTCTGCATTCTCTCATCAATTAAAAGTTGAACCCCTGGCAAATAATAGATATGAAATTTACCCTAGAAAAGGTGAGATTTGGGCTCTATACAAGGACCAGAACTATGAACTGACTTCTTCAACTCAGGGCAGAGGTGCATGTCATATAGTAGAAGTATTAGCAGATAGTTACAAGAGTATCCAAGTTGTTGTTCTGATGCCGCATAGTAACTCTCGGACAATTTTCAAGGCTCCTAGAATTCAGAGATCTAGAACTGGTGTAATTGAAATATTAAGAGAAGAGGTTGGCAGATTTTCACATCAGATTCCTGCTTTTCAGCACAGCGACAATGTTAATCTCAGAGGGTGTTGGGAGCTTGATCCTTCTTCAGTGCCTGATTGTTTCATACCAATAGACTGA 3216 0.407 MECNRDEAMRAKQIAENKMQAGDFEGGLKFATKAQRLFPEIKNIVQIIAVCEVHCAAQKKHFGSDMDWYGILQTEKSADEATIKKQYRKLALLLHPDKNKSAGAEAAFKLIVEANRVLSDQTKRTSYDSKFGVPVGNTAAKVPPRHPNGNAFGTRCDGTARNDQNSFFSQYQAWNAYHRADNQTFWTCCPHCNTRYQYVKTILNHTIRCQHCFKSFTAHDMGNHNVPPGYWSTFNNQKEPPKHASSKEASKNNGGKSSGREQEGVSMSKCSAGISAHSKVAKSRDGHVAAGVTKAGVGTSNPTNSKAKESRASTKVGRKRARQSASDDDNKAGNGKGVKDTKVQENRVDPNRRSSRKKQHVLYTENDKDGDFGSSSKRPRHHESFTSTEMEKREVPAAGVGGKNGEIRNKASAPPEETVLRNKTKVEQTNVQRKEASNSDLNDRKSKADNCSPPKSNLPPSSEICCPDPDFSDFERDKAEDCFAVNQLWAIFDNTDSMPRFYALVKKVYSPFKLRITWLEPDSDDQGEIDWHEAGLPVACGKFKLGHSQRTSDRFMFSHQMHCIKGSETGTYLVYPKKGETWAIFRHWDLGWSSDPEKHSEYQFEYVEVLSDFDENVGIKVAYLSRLKGFVSLFQRTVLNRISFFYILPNELYKLSHRIPSCKMTGAERQDVPRGSFELDPAGLPNSLFEVGDPGVVKMDGVNCSHHEYSKCKVEEAMSNDSIHKAKLRESIDSERVAQILRRSPRSSKKSTDNDQTSTSQYIVRKDDINIGYRVDSPPEGNTTASQTNERKVKTPQKHEKNNNEGETLKARKSPRDLSKKNAQGDAGEWTTSKKTDNHSSNSKNVKGSNIPQSVGATCYGFKKEKSKEMFQCGQIWAIYGDRDHMPDTYAQIKIIECTPNFRLQVSVLEPCSPPNDLKRTISCGTFEVKKAKLQILSLSAFSHQLKVEPLANNRYEIYPRKGEIWALYKDQNYELTSSTQGRGACHIVEVLADSYKSIQVVVLMPHSNSRTIFKAPRIQRSRTGVIEILREEVGRFSHQIPAFQHSDNVNLRGCWELDPSSVPDCFIPID 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03713 1071 MobiDBLite consensus disorder prediction 229 267 - -
Pumo5g03713 1071 MobiDBLite consensus disorder prediction 777 791 - -
Pumo5g03713 1071 MobiDBLite consensus disorder prediction 736 850 - -
Pumo5g03713 1071 SUPERFAMILY Chaperone J-domain 64 130 IPR036869 -
Pumo5g03713 1071 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pumo5g03713 1071 Pfam Domain of unknown function (DUF3444) 462 668 IPR024593 -
Pumo5g03713 1071 Pfam Domain of unknown function (DUF3444) 858 1047 IPR024593 -
Pumo5g03713 1071 MobiDBLite consensus disorder prediction 247 267 - -
Pumo5g03713 1071 MobiDBLite consensus disorder prediction 751 765 - -
Pumo5g03713 1071 CDD DnaJ 67 120 IPR001623 -
Pumo5g03713 1071 SMART dnaj_3 66 123 IPR001623 -
Pumo5g03713 1071 MobiDBLite consensus disorder prediction 311 390 - -
Pumo5g03713 1071 MobiDBLite consensus disorder prediction 825 850 - -
Pumo5g03713 1071 Gene3D DnaJ domain 64 180 IPR036869 -
Pumo5g03713 1071 MobiDBLite consensus disorder prediction 296 310 - -
Pumo5g03713 1071 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 1064 - -
Pumo5g03713 1071 MobiDBLite consensus disorder prediction 792 823 - -
Pumo5g03713 1071 MobiDBLite consensus disorder prediction 736 750 - -
Pumo5g03713 1071 Pfam DnaJ domain 67 128 IPR001623 -
Pumo5g03713 1071 MobiDBLite consensus disorder prediction 292 464 - -
Pumo5g03713 1071 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pumo5g03713 1071 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pumo5g03713 1071 PRINTS DnaJ domain signature 103 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03713 Pumo-Chr5 86776077 86781323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03713 4 228 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.783 1.67e-28 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03713 - - gmx:100782762 1960.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03713 5 86776077 86781323 Pumo5g03713 5 86776077 86781323 ECH
Pumo5g03713 5 86776077 86781323 Pumo3g01920 3 30342779 30344691 PCT