Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03680 ATGACACTGGCATGGGCATGGGCATGGTTGAAACCGAAACCGTCTTCAGTCTCACTCATCCTCATCATCACCCTCGTCCTCATCTTCTTCTCCGTAAACGTAAACGTAAACCCTCCTTCTCCCCTTTCTTCTACGCGGCGTAGGTCACTTCTCCTCCTCACCACTTCTTCATCTTGTTCCAACGAATCCAATGGCCTTCTCAACTACCACTGCCTCTTCCCCCAACATTCCACCCTCTCCATCCCCTTACTCTCGCTCTTCCTCCTCCTCCACTTCTACATCCTCATCACCACCGCGCAGCACCACTTCTCCCTCGTCACCACCAAGCTAGCCTCCCACCTCAACCTCTCCCCCAGCATGGCCGCCGTCACCCTCCTCTCCCTCGGCAACGGCGCCCCCGACGTCTTCTCCTCCCTCGCCGCCCTCCGCGCCGACCACTACCGCACCGGCTTCGGCGCCATCCTCTCCGCCGGAGCATTCGTCTCCGCCCTCGTCGTCGGCTTCGTCGCCATCTACGCTGCGCCCTTCTCCGTCGATCCCGCGCCCTTTGTTAGGGATGTGCTCTTCTACTTGACCGCCGCATTGTTCCTCTTCTACGTCTACCTCAGCGCCGAGATTTTCCTCTGGCAGGCCGTCGGATTCGTCGGCTTCTACTTGTTCTTCGTCGGGTTCGTGTTCTACATGGATTTGGGGATGGCAGATCGCAGGGAGAAGAGTTCCGTGGATCTCGAGGGACAGAAGGAACCGCTTTCCGAATCTCCCCAGGGAGATAAACGCGCTTCTGGTGGAGTGCGTGCAGCTATTCGATTGGTTTGCAATTTCATTTCTAAAACATGGGAGCTTCCTGTCAAAACTCTCCTGAGATTGACAATCCCTCAACCAGCACCTTCACAATGGAGCAGATTTTATGCATCAGCCAATATTGCACTTTGTCCACTAGCCCTCTTATATGCCTGCAACTCATTCATGCCATTTAATCATCCCATAGTTTTCCTCCTCCCCAACACTCACTTCCCCCTCTGGTCAGTAGTGCTCATGACAAGTTTCTCTCTTGCACTTTTCCATTTTGTAATGGAAAAAGAACCCCCCAAGACAGAGCATATGCCTGTGGTCGTCATGGCATTTGTAATGAGTGTGTTTTGGATATCTACTACAGCCGGAGAGCTGGTGAACTGCCTGGAAGCTATAGGCACGCTTCTCAAACTGCCGCCAGCGCTCCTGGGTCTCACAGTGCTGGCATGGGGAAATTCAGTGGGAGATCTTGTTGCTGATGTTGCAGTTGCTAAAGCTGGTCATCCAGCGATGGCAATGGCGGGATGCTTTGCAGGACCAATGTTTAACATGCTTGTTGGCCTTGGAACTGCTTTGGTCATACAGACGGCCAATATATATCCTAGAGCTTATAAGCTTAATTTCCACGTTGGTATTGTGATCGCATTTGTATTCCTCCTTTTAAGCTTAATGGGGTCTCTCTTGGTGATCACTTGGTGCAGATTCAGAGTGCCTAGGTTTTGGGGCTTCTGTCTGGTAGGCATCTATGTTGCTTTTATGGCAGTGAGTTTAGTAATAGCCATGTTTTCAGGGTGA 1587 0.5211 MTLAWAWAWLKPKPSSVSLILIITLVLIFFSVNVNVNPPSPLSSTRRRSLLLLTTSSSCSNESNGLLNYHCLFPQHSTLSIPLLSLFLLLHFYILITTAQHHFSLVTTKLASHLNLSPSMAAVTLLSLGNGAPDVFSSLAALRADHYRTGFGAILSAGAFVSALVVGFVAIYAAPFSVDPAPFVRDVLFYLTAALFLFYVYLSAEIFLWQAVGFVGFYLFFVGFVFYMDLGMADRREKSSVDLEGQKEPLSESPQGDKRASGGVRAAIRLVCNFISKTWELPVKTLLRLTIPQPAPSQWSRFYASANIALCPLALLYACNSFMPFNHPIVFLLPNTHFPLWSVVLMTSFSLALFHFVMEKEPPKTEHMPVVVMAFVMSVFWISTTAGELVNCLEAIGTLLKLPPALLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGTALVIQTANIYPRAYKLNFHVGIVIAFVFLLLSLMGSLLVITWCRFRVPRFWGFCLVGIYVAFMAVSLVIAMFSG 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03680 528 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 274 526 - -
Pumo5g03680 528 MobiDBLite consensus disorder prediction 241 260 - -
Pumo5g03680 528 Gene3D - 116 242 IPR044880 -
Pumo5g03680 528 Gene3D - 304 522 IPR044880 -
Pumo5g03680 528 Pfam Sodium/calcium exchanger protein 372 521 IPR004837 GO:0016020|GO:0055085
Pumo5g03680 528 Pfam Sodium/calcium exchanger protein 85 226 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03680 Pumo-Chr5 86332022 86335304 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03680 18 527 Antiporters AT1G08960 66.417 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03680 K13754 - gmx:100775437 820.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03680 5 86332022 86335304 Pumo5g03680 5 86332022 86335304 ECH