Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03662 ATGCAAGACATTTTCGGATCAGTTCGCCGATCACTGGTATTCCGCGGTTCGCCGGAGAACGAAGAAGCCTCGCTCGGAGTCGGTGGAAGCCTCGTCGATAAGATCAGTTATTGTATCCGAAGTTCCAGAGTCTTCTCCAAACCCTCGCCGCCGTCGCCGTCCATTCCTAAAGACGCTGCGCCTCCGATCCGATGGCGGAAAGGCGAGTTGATCGGTTGCGGCGCCTTTGGCCAAGTCTACGTTGGAATGAATCTCGATTCCGGAGAGCTTCTGGCGGTTAAACAGGTCTTGATTGCGGCAAATAGTGCTTCGAAGGAGAAGGCACAGGCTCACATTAAAGAGCTTGAGGAAGAAGTTAAATTACTGAAAGACCTTTCACATCCCAACATTGTTAGATATTTGGGTACGGTCAGAGAAGAGGACACCCTAAATATTCTCCTGGAGTTTGTTCCTGGTGGATCCATATCATCGCTATTGGGGAAGTTTGGGGCATTCCCTGAGGCTGTAATAAGAACTTACACAAAGCAGCTACTACTTGGACTTGAGTACTTGCACAAAAATGGAATCATGCACAGAGACATTAAGGGGGCCAATATTCTTGTAGATAATAAAGGATGCATAAAACTTGCAGACTTTGGGGCATCCAAACAGGTCGTCGAGCTGGCAACCATTTCTGGTGCCAAGTCCATGAAGGGTACTCCATATTGGATGGCTCCAGAAGTTATTCTCCAGACTGGGCATAGCTTCTCTGCTGACATATGGAGCGTGGGTTGTACTGTGATTGAGATGGCCACTGGAAAGCCTCCCTGGAGTCAGCAATACCAACAAGAGGTTGCTGCTCTCTTCCATATAGGGACAACTAAGTCTCATCCGCCAATCCCTGATCATCTCTCAGCTGCAGCAAAAGATTTTCTGCTAAAATGTTTACAGAAGGAACCAATTTTGAGGTCATCAGCATCAGAACTACTGCAGCATCCCTTTGTTACTGGTGAACATATGAATTCTCTTCCTCTGTCATCTAATGTCACGCTTCTTCACCAATCAGGTGCCCCAAATGCTGAATCCTTCCTTTGCTGTTCAACCGTAAATCCTCTGGACTCGGGAAATAAACAGTCGTGGGGGGGAATGAGCAATGATGATGATATGTGTGTGATTGATGACAAAGAAGAGTTCTCGCAGAGTGATGCCAAATACAAATCATTTATGTCAACTAATATTGAGAGTTTCAACCCAATGTCTGATCCCTCTGATGATTGGGGGTGTAAATTTGATGCAAGTCCAGAACTGGAAAATAGAGGGGTTAATTTTGGCACTGATGAAAGTTATGTGCCACCTGATCTGTCAGGGGATGATAAGGGGCAGAAAGATTTTTCCTTTCCAGGTGTGCCATCTCTGTCAGAGGAAGATGATGAACTCACAGAGTCAAAAATTAAAGCCTTTTTGGATGAAAAGGCTCTTGAACTGAAAAAATTGCAGACACCTTTATATGAAGAGTTTTACAACAGTTTAAATACATCTTGTTCTCCCAATGTAATTGATAGCACAAGTGATGATACTGCTTCTCGAAAATATTTGAAATTACCTCCTAAAAGCAGGTCACCAAGTCGGGTACCAATTAGCACTCCATCTAAAGGCGTTGATAATTCTGGAAGTCCTGGAAGTAATGGCCGGTCCTCATCAACTGTTGGCCATGTAAATAACCATAGTCCACAGGATATTCCAGCATCTCCCCTTAATGAATGGAAAGGACTGATAGTTGACTCTCAGCAGCAGCCCAGTAGCCCAAGTCTAAGCTTTTCTGAGAGACAGAGGAAGTGGAAAGAAGAGCTCGACCAGGAGCTTGAGAGAAAGCGAGAAATGATGCGGCAAGCTGGCATGGGAGGAAAGACATCTTCACCAAAGGATCGAGCTTTACATCGGCAGAGGGAGCGGACAAGATTTGCTTCTCCCAGCAAATAA 1959 0.4538 MQDIFGSVRRSLVFRGSPENEEASLGVGGSLVDKISYCIRSSRVFSKPSPPSPSIPKDAAPPIRWRKGELIGCGAFGQVYVGMNLDSGELLAVKQVLIAANSASKEKAQAHIKELEEEVKLLKDLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQQEVAALFHIGTTKSHPPIPDHLSAAAKDFLLKCLQKEPILRSSASELLQHPFVTGEHMNSLPLSSNVTLLHQSGAPNAESFLCCSTVNPLDSGNKQSWGGMSNDDDMCVIDDKEEFSQSDAKYKSFMSTNIESFNPMSDPSDDWGCKFDASPELENRGVNFGTDESYVPPDLSGDDKGQKDFSFPGVPSLSEEDDELTESKIKAFLDEKALELKKLQTPLYEEFYNSLNTSCSPNVIDSTSDDTASRKYLKLPPKSRSPSRVPISTPSKGVDNSGSPGSNGRSSSTVGHVNNHSPQDIPASPLNEWKGLIVDSQQQPSSPSLSFSERQRKWKEELDQELERKREMMRQAGMGGKTSSPKDRALHRQRERTRFASPSK 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03662 652 CDD STKc_MAPKKK 64 328 - -
Pumo5g03662 652 MobiDBLite consensus disorder prediction 433 470 - -
Pumo5g03662 652 SMART serkin_6 65 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g03662 652 MobiDBLite consensus disorder prediction 583 600 - -
Pumo5g03662 652 Coils Coil 603 623 - -
Pumo5g03662 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Pumo5g03662 652 FunFam Mitogen-activated protein kinase kinase kinase 2 64 354 - -
Pumo5g03662 652 ProSiteProfiles Protein kinase domain profile. 65 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g03662 652 MobiDBLite consensus disorder prediction 507 652 - -
Pumo5g03662 652 SUPERFAMILY Protein kinase-like (PK-like) 64 329 IPR011009 -
Pumo5g03662 652 Pfam Protein kinase domain 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g03662 652 MobiDBLite consensus disorder prediction 601 623 - -
Pumo5g03662 652 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Pumo5g03662 652 FunFam Serine/threonine-protein kinase STE11 61 155 - -
Pumo5g03662 652 Gene3D Transferase(Phosphotransferase) domain 1 64 355 - -
Pumo5g03662 652 MobiDBLite consensus disorder prediction 633 652 - -
Pumo5g03662 652 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 53 336 - -
Pumo5g03662 652 MobiDBLite consensus disorder prediction 534 574 - -
Pumo5g03662 652 Coils Coil 98 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03662 Pumo-Chr5 86245787 86251226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03662 1 652 MAP Kinase Kinase Kinase AT1G54960 58.129 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pumo5g03662 Pkinase 8.6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03662 K20606 - gmx:100807537 1178.7