Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03646 ATGGTGTGGGATAAGCTACGAACAAGCTCATTTGAGTTGGATGAGGTAATGATCGAGTCACTCTTTGGCTACAATTTACAAAACTCAATGAAGAATGACGAAACAAAGAGCAAAACACCTTCTCCTAGCAAGCATGTACTTGAGCCAAAACGGTTGCAGAACATAGCAATACTCTCGAAAGCTCTAAATACCACAGCTGAACAAGTATGCGAAGCCCTGATACTAGGGAAAGGCTTGTCTTTGGAACAACTAGAGGCACTGGTGAAAATGGTACCCACGAAGGAAGAAGAGGCTAAGCTCTTAAGCTACAAAGGAGACATCAATGAACTAGGGTCCGCTGAAAAGTTTGTGAGAGCAATGCTTAGCATACCATTTGCCTTTAAACGAGTGGAAGCCATGCTTTACAGAGAGACTTTCGAAGATGAAGTAGTTCACCTCAGTAACTCTTTTTCAACGCTAGAGGAAGCGTGCAAGGAACTAAGGTCAAGCAGGTTCTTCTTGAAATTGCTGGAAGCAGTGCTGAAAACAGGAAACCGCATGAACGTTGGGACAATCAGGGGAGGTGCCAGAGCCTTCAAACTCGATGCCCTTCTCAAGCTTGCTGATGTTAGAGGAACCGATGGTAAAACCACCTTGCTCCATTTCTTTGTTCAGGAGATTGTTCGCTCAGAAGGAATCAAAGCTTCAGAGAGGATCATGGGGCAGCAGAACCACAAGAGTGAAAACAGAACGGAGGAAGAGAAGGAAGAAGACTACAGAAGAATGGGACTAGAACTTGTTTCTGGTCTGAGTGCTGAGTTATGTAATGTTAAGAAGACAGCCACAATTGACTTGGATGTTCTTGCAAGCTCTGTCTCAAACCTATCAAGTGGAGTGGCTAACATGCAGAACCTGGTAAAGGGTCTGTTGTGTGAGGATGAAAAGAGTGAGAGCTTTGTCATTTCTATGAAGTGGTTTCTGAATTACGCAGAAAGAAAGGTGCAGAACTTGCAGGGAGATGAAGGTAGAGTCATGGCTCGTGTCAAAGAAATAACTGAGTATTTTCATGGGGATGTGAGTAAAGAAGAGTCGAATCCACTTCGAATTTTTGTGATCGTGAGGGACTTTCTGGAGATGGTAGATAATGTGTGTAATGAGCTTAAAAGGTCTACGAAATCACCTCGCACCATTCGGATAGAGTAG 1182 0.4374 MVWDKLRTSSFELDEVMIESLFGYNLQNSMKNDETKSKTPSPSKHVLEPKRLQNIAILSKALNTTAEQVCEALILGKGLSLEQLEALVKMVPTKEEEAKLLSYKGDINELGSAEKFVRAMLSIPFAFKRVEAMLYRETFEDEVVHLSNSFSTLEEACKELRSSRFFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVRGTDGKTTLLHFFVQEIVRSEGIKASERIMGQQNHKSENRTEEEKEEDYRRMGLELVSGLSAELCNVKKTATIDLDVLASSVSNLSSGVANMQNLVKGLLCEDEKSESFVISMKWFLNYAERKVQNLQGDEGRVMARVKEITEYFHGDVSKEESNPLRIFVIVRDFLEMVDNVCNELKRSTKSPRTIRIE 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03646 393 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 393 IPR015425 -
Pumo5g03646 393 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1 385 - -
Pumo5g03646 393 PANTHER FORMIN-RELATED 1 387 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pumo5g03646 393 Pfam Formin Homology 2 Domain 1 374 IPR015425 -
Pumo5g03646 393 Gene3D Formin, FH2 domain 1 390 IPR042201 -
Pumo5g03646 393 SMART it6_source 1 388 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03646 Pumo-Chr5 86078396 86080337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03646 1 390 FH2 protein (formin) Gene Family AT3G05470 71.066 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03646 - - gmx:100805407 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03646 5 86078396 86080337 Pumo5g03646 5 86078396 86080337 ECH