Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03628 ATGATGATGATGACAATGGAGGGGATGATGGACAAAGGGGTGTTGGATGATGTGATAAGGAGGCTCCTCGAAGGGAAAGGAGGGAAACAGGTGCAGCTCTCTGAGTCGGAGATCCGTCAACTCTGCGTCAACGCCAGACAAATCTTCCTCTCTCAGCCAATTCTCCTTGAGCTCCGTGCTCCCATCCGAATCTGCGGTGATATACATGGTCAGTACCAGGACTTGCTGAGGCTTTTTGAATATGGTGGCTACCCTCCTGCGGCAAACTACTTGTTTCTGGGGGATTATGTGGATAGAGGGAAGCAAAGTTTGGAGACTATATGTTTGCTTTTGGCCTACAAAATAAGATATCCAGACAAAATTTATCTCTTGAGGGGAAACCATGAAGAGGCAAAGATAAACCGAATATACGGTTTTTATGATGAATGTAAAAGAAGGTTCAATGTTAGGCTGTGGAAGATATTTACCGACTGCTTTAACTGTTTGCCGGTGGCTGCACTCATTGATGAGAAAATACTTTGTATGCATGGGGGACTCTCTCCAGAATTAGAAAATTTAGATCAGATAAGGGAGATTCAGAGGCCTACTGAAATTCCAGATAGTGGCCTCTTATGTGATCTGCTTTGGTCTGATCCTGATTCTAGCATTGAGGGCTGGGCAGAGAGCGACCGAGGTGTTTCATGTACTTTTGGACCTGATGTAGTTGCAGAGTTTTTGGATAAAAATGACCTTGATCTTGTTTGCAGAGGGCATCAGGTTGTAGAGGATGGATACGAGTTTTTTGCTAAAAGAAGATTAGTCACGATATTTTCTGCTCCAAATTATGGTGGGGAATTTGACAACGCTGGTGCATTGTTAAGCGTTGATGATTCTCTTGTATGTTCCTTTGAGATATTGAAACCCGCTGATAGAGCATCAGGAAGTAGTTCATCAAAAATGAATTTTAAGAAGGTAAATATCAACAATCAGCTGTTGTATTTTTTTGGAGTCTTGTATTATTTTTGA 1005 0.4219 MMMMTMEGMMDKGVLDDVIRRLLEGKGGKQVQLSESEIRQLCVNARQIFLSQPILLELRAPIRICGDIHGQYQDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIYLLRGNHEEAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPELENLDQIREIQRPTEIPDSGLLCDLLWSDPDSSIEGWAESDRGVSCTFGPDVVAEFLDKNDLDLVCRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDDSLVCSFEILKPADRASGSSSSKMNFKKVNINNQLLYFFGVLYYF 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03628 334 PRINTS Serine/threonine phosphatase family signature 123 147 IPR006186 GO:0016787
Pumo5g03628 334 PRINTS Serine/threonine phosphatase family signature 265 281 IPR006186 GO:0016787
Pumo5g03628 334 PRINTS Serine/threonine phosphatase family signature 61 88 IPR006186 GO:0016787
Pumo5g03628 334 PRINTS Serine/threonine phosphatase family signature 90 117 IPR006186 GO:0016787
Pumo5g03628 334 PRINTS Serine/threonine phosphatase family signature 157 183 IPR006186 GO:0016787
Pumo5g03628 334 PRINTS Serine/threonine phosphatase family signature 186 213 IPR006186 GO:0016787
Pumo5g03628 334 PRINTS Serine/threonine phosphatase family signature 243 263 IPR006186 GO:0016787
Pumo5g03628 334 SUPERFAMILY Metallo-dependent phosphatases 16 304 IPR029052 -
Pumo5g03628 334 Gene3D - 8 310 IPR029052 -
Pumo5g03628 334 CDD MPP_PP1_PPKL 14 301 - -
Pumo5g03628 334 SMART pp2a_7 33 303 IPR006186 GO:0016787
Pumo5g03628 334 FunFam Serine/threonine-protein phosphatase 5 311 - -
Pumo5g03628 334 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 19 312 - -
Pumo5g03628 334 ProSitePatterns Serine/threonine specific protein phosphatases signature. 124 129 IPR006186 GO:0016787
Pumo5g03628 334 Pfam Calcineurin-like phosphoesterase 62 253 IPR004843 GO:0016787
Pumo5g03628 334 Pfam Serine-threonine protein phosphatase N-terminal domain 15 59 IPR031675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03628 Pumo-Chr5 85895564 85899021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03628 62 249 Calmodulin-binding Proteins AT5G63870 33.184 3.03e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03628 K06269 - gmx:100813792 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03628 5 85895564 85899021 Pumo5g03628 5 85895564 85899021 ECH