Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03627 ATGGGGATCGATCTTAAGGCTGGAGGTAAGAGCAAAAAGACCAAAAGAACAGCACCAAAGTCCAATGATATCTACCTCAAACTACTTGTCAAGCTTTATAGATTCCTTGTTCGAAGGACTGGCAGCAATTTCAATGCTGTGATACTCAAGCGCTTGTTCATGAGCAAGGTTAACAAGCCTCCAATTTCTTTGTCAAGGTTGATTAAGTATACAAAGGGGAAGGAAGACAAAATTGCTGTTGTAGTGGGGATTGTAACTGATGATATCAGAGTATATGAAGTTCCAGCATTGAAAATTACAGCACTCAAGTTTACAGAGAGAGCACGTGCAAGAATAGAAAAGGCAGGCGGTGAATGCTTGACATTTGATCAGCTTGCCCTTAGGGCTCCTTTGGGACAGAATACGGTCCTTCTTAGAGGCCCCAAGAATGCTCGGGAAGCTGTGAAACACTTTGGTCCTGCTCCTGGTGTGCCACACAGCCATACCAAGCCCTATGTACGATCTAAGGGAAGAAAGTTCGAGAGGGCTAGAGGAAGGAGGAACAGCAAAGGATTTAGAGTTTAA 564 0.4397 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPISLSRLIKYTKGKEDKIAVVVGIVTDDIRVYEVPALKITALKFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSKGFRV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03627 187 FunFam 60S ribosomal protein L18 1 187 - -
Pumo5g03627 187 Gene3D - 1 187 - -
Pumo5g03627 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 187 IPR000039 GO:0003735|GO:0005840|GO:0006412
Pumo5g03627 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Pumo5g03627 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Pumo5g03627 187 MobiDBLite consensus disorder prediction 151 187 - -
Pumo5g03627 187 MobiDBLite consensus disorder prediction 164 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03627 Pumo-Chr5 85889600 85891562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03627 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 76.882 9.81e-102 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03627 K02883 - gmx:100527681 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03627 5 85889600 85891562 Pumo3g01999 3 31146497 31148662 PCT