Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03620 ATGGCGAACACGATACCTGCATGTTATGAGGTATCTATAGTCAATCCTAGTCCAATATGGCAAACTGATAAAGTCCTAAAAACAGAGCTCCCTCTTCTCGCTTTTCAAATTTCCTTTGTTGTCGTGTTGTCTCGTGTTTTCTTCCTTATCTACAAACCTCTCCATCAAACTCGTCTTATTGCACAAATCTCTGTTGGTTTCCTACTAACTCCACCATTACTTGGGAGATTCACACCAATATTTGAGTTCATATTTCCTGTAAATGGGATCCTTAATATTGAAGTCCTTTCCAACATTGGTCTCATCTATTATGCATTCCTCAGCGGTTTGGAGATGAACTTAAATACCATTCTACAAGTTAAAAAGAAGGCTGCAAGCATTGCAATTGCCGGGATCATCTTTCCTTTGGTACTAGGACCGGCCTTATTTGTTCTATTTCGAAAATTTTACGGCAATGAAGGAGTATTTCGCCTTGAAGAAAGTACAAGTAATGCTTTTATACTTTGGACTTTAGTTCTCACTGTTACAGGTTTTCCTGTCCTAGCTCACACACTTTCTGAGCTCAAGCTCCTTTATACTGGTCTTGGCAAAGCCGCTTTAACAGCAGCCATGATCAGTGACACCTATGGTTGGATCCTTTTCACTTTACTGGTTCCATTTGCTAATTAA 669 0.3946 MANTIPACYEVSIVNPSPIWQTDKVLKTELPLLAFQISFVVVLSRVFFLIYKPLHQTRLIAQISVGFLLTPPLLGRFTPIFEFIFPVNGILNIEVLSNIGLIYYAFLSGLEMNLNTILQVKKKAASIAIAGIIFPLVLGPALFVLFRKFYGNEGVFRLEESTSNAFILWTLVLTVTGFPVLAHTLSELKLLYTGLGKAALTAAMISDTYGWILFTLLVPFAN 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03620 222 Gene3D - 32 222 IPR038770 -
Pumo5g03620 222 Pfam Sodium/hydrogen exchanger family 40 221 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pumo5g03620 222 PANTHER CATION/H + ANTIPORTER 15 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03620 Pumo-Chr5 85685055 85685802 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03620 19 221 Antiporter Super Family AT4G23700 37.438 1.67e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03620 - K26731 gmx:100818017 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03620 5 85685055 85685802 Pumo5g03620 5 85685055 85685802 ECH