Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03617 ATGTTTTGTTTCTGTCCTCGCTTTGATGAATTTGGGTGGAGGTGTCAGATTCCACACTACATAATACACTTTAACGGGGAAATTAATCACAAAAAGTGTCGTGTGGGGAATTACATTGTAGAGTTGATGGGGCATTTTTCCTCAATGTTCAATGGGTTGGCACGGTCTTTTTCAATGAAGAAAGGAAGAAAGAATGGGAAATGTGGAGGCAGGGAAGCTGCTGAAGCAATGGCAAAGGAAGCTAAGAAGAATGACATGATGTTGTGTAGCTCTGGCATTGTTCATGTCGATGGTTCAAACAACTTTGCCTCCGTTTTCTCCAAAAGAGGCCAGAAAGGAGTGAACCAAGATTGCTGCGTAGTATGGGAGGAATTTGGATGCCAAGAGGACATGATCTTTTGTGGGATATTTGATGGGCATGGACCATGGGGTCACTTTGTGGCCAAAAGAGTAAGAGAGTCAATGCCACCATCTTTGCTATGCAACTGGCAGGAGACACTGGCCCAAACTTCAATTGATCCGGCTATTGATGTAGAGGAAGAGAAAGGCAAACAATACAGATTCAACATATGGAAGCATTCTTACTTGAAGACTTGTGCTGCCATTGATCAAGAACTAGAGCAATACCGCAAGATAGACTCATTTTACAGCGGAACAACTGCCCTATCAATTGTTAGACAGGGTGAACTCATTGTCATAGCAAATGTTGGTGACTCTCGTGCTGTGTTGGCTACAACATCAGATGATGGAAGTTTGGTACCAGTTCAACTAACAATTGATTTCAAGCCCAATTTACCCCAGGAGGCAGAGAGAATAATTCAGTGCCAGGGGCGTGTGTTCTGCTTAGAGGACGAGCCAGGGGTGCATAGGGTGTGGTTACCGGATGCAGAATCTCCAGGACTAGCCATGTCTAGGGCCTTTGGTGACTACTGCATTAAAGGGCATGGTCTAATTTCTGTGCCTGAGGTAACACACAGAAATATAAGTAGTAGAGACCAGTTTGTTGTGCTAGCCACTGATGGGGTATGGAGTCTTGTCCTTGAAACTGTTTTTGTGTTTACATATTCTGATAGAAATTAA 1080 0.437 MFCFCPRFDEFGWRCQIPHYIIHFNGEINHKKCRVGNYIVELMGHFSSMFNGLARSFSMKKGRKNGKCGGREAAEAMAKEAKKNDMMLCSSGIVHVDGSNNFASVFSKRGQKGVNQDCCVVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRESMPPSLLCNWQETLAQTSIDPAIDVEEEKGKQYRFNIWKHSYLKTCAAIDQELEQYRKIDSFYSGTTALSIVRQGELIVIANVGDSRAVLATTSDDGSLVPVQLTIDFKPNLPQEAERIIQCQGRVFCLEDEPGVHRVWLPDAESPGLAMSRAFGDYCIKGHGLISVPEVTHRNISSRDQFVVLATDGVWSLVLETVFVFTYSDRN 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03617 359 Gene3D - 94 352 IPR036457 -
Pumo5g03617 359 CDD PP2Cc 101 343 IPR001932 -
Pumo5g03617 359 ProSiteProfiles PPM-type phosphatase domain profile. 102 359 IPR001932 -
Pumo5g03617 359 SUPERFAMILY PP2C-like 98 346 IPR036457 -
Pumo5g03617 359 PANTHER PROTEIN PHOSPHATASE 82 346 IPR015655 GO:0004722|GO:0006470
Pumo5g03617 359 Pfam Protein phosphatase 2C 126 346 IPR001932 -
Pumo5g03617 359 SMART PP2C_4 95 354 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03617 Pumo-Chr5 85657752 85661442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03617 43 342 PP2C-type Phosphatase Gene Family AT5G27930 74.086 1.65e-172 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03617 - - gmx:100808955 601.668