Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03613 ATGAGTAGGATTGAATTATCGAGGACGAAGCCAGCGCCGGTTCCATTGGGGACTCTGATTGGCCGTGAGCTTCGAAATGGAAAAGTTGAAAAACCTTTCGTGAAATATGGACAAGCTGGATTGGCCAAGAAAGGAGAAGATTACTATCTGATCAAGACAGATTGCCTCAGGGTTCCTGGGGATGCATCAACGGCGTTTTCTGTCTTTGCGATCTTTGATGGGCATAATGGTATATCAGCTGCTATTTTTGCAAAGGAAAACTTGCTAAGTAATGTTTTGAGTGCAATACCTCAAGATATTAGCAGGGATGCTTGGCTTCAGGCTCTTCCTCGTGCTCTGGTTGTTGGTTTTGTGAAGACTGACATAGAGTTTCAGCAAAAGGGGGAAACTTCTGGAACAACAGCTACATTTGTTTTGGTTGATGGATGGACTGTCACTGTTGCATCTGTTGGGGATTCCCGCTGCATATTAGATACTCAGGGAGGTGTAGTTTCTCTATTGACAGTTGATCACAGACTGGAAGAGAATGCAGAAGAGAGGGAGCGTGTTACTGCCAGCGGTGGTGAAGTAGGAAGACTCAATGTATTTGGAGGCAATGAGGTTGGGCCTCTTCGCTGCTGGCCAGGTGGATTGTGCCTATCTAGATCAATAGGTGACACAGACGTGGGAGAATTTATTGTGCCAATACCACATGTTAAGCAAGTGAAGCTTTCAAATGCTGGTGGAAGGCTTATTATAGCTTCTGATGGTATTTGGGATGCTTTATCATCCGATATTGCTGCTAAGTCTTGTCGGGGTCTACCTGCAGAGCTTGCTGCAAAACTGGTGGTTAAGGAAGCTCTAAGGTCAAGGGGCCTCAAGGATGATACAACCTGCCTTGTTGTAGATATTATTCCTTCGGACCTCCCTGTATTACCACCAATTCCAAGAAAGAAACACAATATGCTAACTTCGCTCCTATTTTTTGGAAAGAAATCTGAGAACTCTGTGAACAAAGCTACCAATAAGCTTTCTGCAGTTGGTGTTGTGGAGGAGTTATTTGAAGAGGGTTCTGCAATGCTTACAGAAAGGCTAGGTAAGGATTTTCCGCTTAATAGGAATTCTGGTATTTTCCGCTGTGCGGTTTGCCAAGTGGACCAACCCCCTGGTGATGGTTTATCGGTGAACTCTGGGCCTTTTTTCTCTCCAGCATCTAACCCATGGGAAGGCCCATTCCTCTGCACAAACTGTCGGAAGAAGAAAGATGCCATGGAAGGAAAAAGGCCTAGCGGACCCACCGTTACAGCATAG 1290 0.4543 MSRIELSRTKPAPVPLGTLIGRELRNGKVEKPFVKYGQAGLAKKGEDYYLIKTDCLRVPGDASTAFSVFAIFDGHNGISAAIFAKENLLSNVLSAIPQDISRDAWLQALPRALVVGFVKTDIEFQQKGETSGTTATFVLVDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDIAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDLPVLPPIPRKKHNMLTSLLFFGKKSENSVNKATNKLSAVGVVEELFEEGSAMLTERLGKDFPLNRNSGIFRCAVCQVDQPPGDGLSVNSGPFFSPASNPWEGPFLCTNCRKKKDAMEGKRPSGPTVTA 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03613 429 FunFam probable protein phosphatase 2C 5 35 302 - -
Pumo5g03613 429 SMART PP2C_4 23 295 IPR001932 -
Pumo5g03613 429 Pfam Protein phosphatase 2C 63 278 IPR001932 -
Pumo5g03613 429 SUPERFAMILY PP2C-like 38 297 IPR036457 -
Pumo5g03613 429 SMART PP2C_SIG_2 50 297 IPR001932 -
Pumo5g03613 429 CDD PP2Cc 43 297 IPR001932 -
Pumo5g03613 429 Gene3D - 33 301 IPR036457 -
Pumo5g03613 429 PANTHER PROTEIN PHOSPHATASE 46 296 IPR015655 GO:0004722|GO:0006470
Pumo5g03613 429 ProSiteProfiles PPM-type phosphatase domain profile. 25 297 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03613 Pumo-Chr5 85607542 85610679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03613 1 428 PP2C-type Phosphatase Gene Family AT1G09160 77.336 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03613 - - gmx:100807886 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03613 5 85607542 85610679 Pumo5g03613 5 85607542 85610679 ECH