Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03612 ATGGCAACTGAACCAGTTTTAACATTCTCTCTTGCTTCTGTGGTCGAAGAAGTTCTTCAACAGCATGGTGGCCGGTTGGACGTCAACTTGGCATCAAGAAAAGCTGAAGAAGCTTCCTTGAGAAGGTATGAAGCAGCTGGTTGGCTGCGGAAGACAGTTGGAGTTGTTGGAGGGAAAGACTTGCCGGCCGAGCCTTCTGAAGAAGACTTCAGGATTGGATTGCGTAGTGGGATTATTCTATGCAATGTTCTTAACAAAATTCAACCTGGAGCAGTGTCCAAGGTAGTTGAAGGCCCCTGCGATTCTGTTATTGTTCCTGATGGGGCAGCACTGTCTGCGTACCAATACTTTGAAAATGTAAGGAATTTTCTTGTGGCTGTGGAGGAAATGGGGCTTCCTTCCTTTGAAGCTTCTGATTTGGCACAGGGAGGAAAGTCTTCAAGGATAGTGAATTGTGTTTTAGCACTCAAGTCCTATGCTGAAAGGAAACTTGGAGGAGGAAGTGGGTCGTCTAAATATATTGGGGTTGCGAATGCGAAGCCACCTACCTCTGGGAAACCACTTTTGAGGAAAAGCTCGGAACCATTCATGAAGTCTATGTGGACTATGCCATCAGGATCAGGGGACAGAGATGGTTATATGAGTGATCCCGGGCATGATCTAAATGATAATAGGGATTCCACTTCTTCCTTAAATTCACTAGTTCGTCAATATTTGTCTGACAAGAAGCCAGAAGAAATTCCCACTGTAGTGGAATCCCTGCTTACCAAAGTCATGGAGGAATTTGAACATCACATGCAAATCCGACATGAAACGTGTAAAACAACTCAAGAATATAAAGCACCATCTGAATCAGAATGTTCAATTTCAGAAGCTGCTTCTATTAATGAAAGGATGGAAGAAAAGGATGATGAACAGAACGTACAAGATGAACAGAACGTACAAGATGAACAGAACATACAAGATAAACAAGAGGAAATTTATGAAGAGAAGCACAGTGAGCATGAAGACTCAAGCCGCCAGATGTTGATTTTGAAGCAGCAAAATATAGTCGAAAAACAAAATAGAAGTATCCAGGAATTGAAAAGCATTGTCCATCAAACAAAATTAGGAATGCAATTCATGCAAAATGAACACCAGAAAGAGATCATTAATCTAAGTAAGCACCTGCATAGCCTAGCTTCTGCTGCTTCAGGATATCATAAAGTTCTTGACGAAAACCGCAAGCTATACAATATAGTGCAGGATTTGAAAGGAAATATTAGGGTGTACTGTAGAGTTCGACCCTTCTTGGGTGGGCAACCAAGCCATTATAGCTCAGTCGGTAATGTGGAAGAGGGAAATATCTCAATCATAACACCTTCCAAATACGGCAAAGAGGGGAAGAAAACATTTAATTTCAATAGAGCATTTGGTCCTTCTGCAACCCAAGGGGAAGTTTTCGCAGACACGCAGCCTCTTATTCGTTCTGTTCTGGATGGTTACAATGTCTGTATATTTGCCTATGGCCAAACGGGATCAGGAAAAACATTCACTATGTCTGGACCAGATGATCTTAATGAGGAAACCATGGGTGTCAACTACCGTGCGCTGAGAGATCTTTTCTATCTCTCGGATCAGAGGAAAGACACCATTTCTTATGAAATCCATGTTCAGATGCTTGAGATTTACAATGAGCAAGTCAGGGACCTACTAACGACAGACGAAATCCGCAACAGTACCCATAATGGCATCAACGTGCCAGATGCCAACCTTGTTCCGGTTTCGTGCACTTCTGATGTCATAAATTTGATGAACTTGGGACATAAGAATCGTGCTGTTGGTTCTACTGCCATGAATGATCGTAGTAGTCGTTCTCACAGCTGCCTAACAGTTCATGTTCAAGGAAAGAACCTGACATCAGGAAGTACTATTCGTGGTAGTATGCATCTGGTTGACCTGGCAGGAAGTGAGAGAGCTGATAAAACTGAGGCCACAGGTGATAGACTTAAGGAGGCTCAACATATCAATAAGTCACTTTCTGCCTTAGGTGATGTAATTTCTTCCCTTGCCCAAAAGAATGCACATGTTCCCTACAGGAATAGCAAACTCACTCAGCTGCTTCAGGATTCTCTTGGAGGGCAAGCAAAGACTCTCATGTTTGTTCATATAAGTCCGGAGCCAGAAGCTATTGGAGAAACACTTAGCACACTCAAATTCGCTGAACGAGTCTCCTCTGTTGAACTCGGTGCTGCGCGAGTTAATAAAGATAATTCAGATGTGAAAGAGCTTAAAGAACAGATTGCTAGTTTGAAAGCAGCCTTAGCAAGAAAGGAGGGAGGAGAAGCAGAACACTTTCAACAATCTGTCAACAGTAGTAGCCCTGAAATACCCAAGTTGAAATCGTATGCATCTTCTCCTCCTATGCAACGTAGTTTGACAGGTGGTGCCCGTAAGCTACCAAAAGATGATTCTAGTAGCCTGGATGGCCAGAAAAATGCTGCATCAAAGTTAAAAAGACGAAGCCTAGATCTGCATGACATGCGTAAGAATTCACCTCCGTGGCCGCCTGCTAGAAGTCATGGAAAGGAGGAAGACAAAGAATCAGTTTCTGGGGATTGGGTTGATAAGATTTCGATAAAAAGAAATGACAGCTTAACTAGTGATGATAGTCTGGTGGGACAGTGGGAAGCAGAAAGCAAACAATCTTCTCCAATGTTAAGTCCCACTTTTCTCTCAGAGCCTTCTAAAATACGCCTGGATAGAAAGGATAACCAACAAGACTCTGAAGATTTACATAGGCAAGGCTTTGATATGGCCACCACAGATGAATCTGATGAGCTTGAGATTGCAACTAGTGATTCTTCAGAATCAGACTTGCATTGGCCAACACATATACCTAAACCAATCACCATTTCAAGCGGATTAGGCATTAAAGCAAAAAAGAAACCAATTAATCCCAGACCAGCAAAGAACCCAGAACCCAGGAGTATGATCCCATCATTAATTCCTGTGCCTGTGCCATCAAGGAAACAACCTACCCTAGCTACTCAAGCAAGAAAGCACCCAGGATCCATTGATGTAAAGAGAAGGAATGGGAATGCCAAGTGA 3090 0.4275 MATEPVLTFSLASVVEEVLQQHGGRLDVNLASRKAEEASLRRYEAAGWLRKTVGVVGGKDLPAEPSEEDFRIGLRSGIILCNVLNKIQPGAVSKVVEGPCDSVIVPDGAALSAYQYFENVRNFLVAVEEMGLPSFEASDLAQGGKSSRIVNCVLALKSYAERKLGGGSGSSKYIGVANAKPPTSGKPLLRKSSEPFMKSMWTMPSGSGDRDGYMSDPGHDLNDNRDSTSSLNSLVRQYLSDKKPEEIPTVVESLLTKVMEEFEHHMQIRHETCKTTQEYKAPSESECSISEAASINERMEEKDDEQNVQDEQNVQDEQNIQDKQEEIYEEKHSEHEDSSRQMLILKQQNIVEKQNRSIQELKSIVHQTKLGMQFMQNEHQKEIINLSKHLHSLASAASGYHKVLDENRKLYNIVQDLKGNIRVYCRVRPFLGGQPSHYSSVGNVEEGNISIITPSKYGKEGKKTFNFNRAFGPSATQGEVFADTQPLIRSVLDGYNVCIFAYGQTGSGKTFTMSGPDDLNEETMGVNYRALRDLFYLSDQRKDTISYEIHVQMLEIYNEQVRDLLTTDEIRNSTHNGINVPDANLVPVSCTSDVINLMNLGHKNRAVGSTAMNDRSSRSHSCLTVHVQGKNLTSGSTIRGSMHLVDLAGSERADKTEATGDRLKEAQHINKSLSALGDVISSLAQKNAHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPEAIGETLSTLKFAERVSSVELGAARVNKDNSDVKELKEQIASLKAALARKEGGEAEHFQQSVNSSSPEIPKLKSYASSPPMQRSLTGGARKLPKDDSSSLDGQKNAASKLKRRSLDLHDMRKNSPPWPPARSHGKEEDKESVSGDWVDKISIKRNDSLTSDDSLVGQWEAESKQSSPMLSPTFLSEPSKIRLDRKDNQQDSEDLHRQGFDMATTDESDELEIATSDSSESDLHWPTHIPKPITISSGLGIKAKKKPINPRPAKNPEPRSMIPSLIPVPVPSRKQPTLATQARKHPGSIDVKRRNGNAK 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03612 1029 MobiDBLite consensus disorder prediction 852 877 - -
Pumo5g03612 1029 MobiDBLite consensus disorder prediction 878 904 - -
Pumo5g03612 1029 MobiDBLite consensus disorder prediction 772 1029 - -
Pumo5g03612 1029 SUPERFAMILY Calponin-homology domain, CH-domain 42 168 IPR036872 -
Pumo5g03612 1029 Coils Coil 747 774 - -
Pumo5g03612 1029 ProSiteProfiles Calponin homology (CH) domain profile. 39 161 IPR001715 GO:0005515
Pumo5g03612 1029 FunFam Kinesin-like protein KIN-14I isoform A 26 178 - -
Pumo5g03612 1029 Pfam Calponin homology (CH) domain 42 161 IPR001715 GO:0005515
Pumo5g03612 1029 PRINTS Kinesin heavy chain signature 641 659 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g03612 1029 PRINTS Kinesin heavy chain signature 610 627 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g03612 1029 PRINTS Kinesin heavy chain signature 494 515 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g03612 1029 PRINTS Kinesin heavy chain signature 690 711 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g03612 1029 MobiDBLite consensus disorder prediction 298 320 - -
Pumo5g03612 1029 MobiDBLite consensus disorder prediction 205 229 - -
Pumo5g03612 1029 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 420 772 IPR027417 -
Pumo5g03612 1029 Gene3D Kinesin motor domain 415 781 IPR036961 -
Pumo5g03612 1029 Gene3D - 24 174 IPR036872 -
Pumo5g03612 1029 PANTHER KINESIN-LIKE PROTEIN KLP-3 46 914 IPR027640 GO:0003777|GO:0007018
Pumo5g03612 1029 FunFam Kinesin-like protein KIN-14I isoform A 415 783 - -
Pumo5g03612 1029 SMART kinesin_4 418 748 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g03612 1029 MobiDBLite consensus disorder prediction 778 805 - -
Pumo5g03612 1029 SMART ch_5 41 159 IPR001715 GO:0005515
Pumo5g03612 1029 CDD CH_AtKIN14-like 41 158 - -
Pumo5g03612 1029 Pfam Kinesin motor domain 426 740 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g03612 1029 ProSitePatterns Kinesin motor domain signature. 640 651 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pumo5g03612 1029 CDD KISc_C_terminal 418 742 - -
Pumo5g03612 1029 MobiDBLite consensus disorder prediction 827 841 - -
Pumo5g03612 1029 MobiDBLite consensus disorder prediction 909 934 - -
Pumo5g03612 1029 ProSiteProfiles Kinesin motor domain profile. 420 740 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03612 Pumo-Chr5 85596559 85602341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03612 408 740 Calmodulin-binding Proteins AT5G65930 41.471 1.81e-74 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03612 K10406 - gmx:100799535 1805.42