Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03608 ATGGATCGGGAAGGAGGATCCAACGGCGGATCTTGCTACTACTCCGTTCTCGGGATTCGTAGGGACGCCTCCTTCTCTGATATTCGCACTGCCTACCGCAAACTCGCTATGAGGTGGCACCCGGACAAGTGGGCTCGGAATCCCGCAACCGCCGGAGAAGCCAAGCGGCGGTTTCAGCAAATCCAAGAAGCCTATTCAGTTCTCTCCGATCAGTCTAAAAGGTCAATGTACGATGCGGGGCTCTACGATCCTTTGGAGGAAGACGACCAAGAGTTTTGTGACTTCATGCAAGAGATGATATCGATGATGAACAATGTGAAAGACGAGGGGGACAGTTTGGAGGACCTACAGAGGATGTTCGTGGAGATGGTGGGGGGAGATCATGGGATCGGCTTTGACTTGAACCAGGATCAGACGGCTGGGAAGCGTGGACGCGTAAATGGATCAATGGGCAACGCGGCCAAGCGCAGCAACTCTCGCTCTTAG 486 0.5391 MDREGGSNGGSCYYSVLGIRRDASFSDIRTAYRKLAMRWHPDKWARNPATAGEAKRRFQQIQEAYSVLSDQSKRSMYDAGLYDPLEEDDQEFCDFMQEMISMMNNVKDEGDSLEDLQRMFVEMVGGDHGIGFDLNQDQTAGKRGRVNGSMGNAAKRSNSRS 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03608 161 Pfam DnaJ domain 13 78 IPR001623 -
Pumo5g03608 161 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Pumo5g03608 161 Gene3D DnaJ domain 2 103 IPR036869 -
Pumo5g03608 161 MobiDBLite consensus disorder prediction 140 161 - -
Pumo5g03608 161 PANTHER PUTATIVE, EXPRESSED-RELATED 7 138 - -
Pumo5g03608 161 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Pumo5g03608 161 PRINTS DnaJ domain signature 32 47 IPR001623 -
Pumo5g03608 161 PRINTS DnaJ domain signature 14 32 IPR001623 -
Pumo5g03608 161 PRINTS DnaJ domain signature 53 73 IPR001623 -
Pumo5g03608 161 MobiDBLite consensus disorder prediction 135 161 - -
Pumo5g03608 161 CDD DnaJ 12 70 IPR001623 -
Pumo5g03608 161 SMART dnaj_3 11 73 IPR001623 -
Pumo5g03608 161 SUPERFAMILY Chaperone J-domain 12 84 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03608 Pumo-Chr5 85551826 85554103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03608 12 79 C2H2 Transcription Factor Family AT1G74250 43.478 5.33e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03608 - - gmx:548049 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03608 5 85551826 85554103 Pumo5g03608 5 85551826 85554103 ECH