Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03606 ATGGCATCGAAGAGGACATTTGACGAGGAGGACCATCAGAATAATGATGACAGAGATCTTCAAATTCGTCCTAAGAGGAGACATGGCGACCCACAAGAAGCAGAGGCCACGCACCTTTCGTTCCTTATCGCCTCGCACTTGGTACCTGTAGTTCGAAACGTGAAATTCGGCAAGGTTAATAGATGGGACAAAATCATTGCACATGCTAAAGATTGTGAAATAGATGCTTATGAGCGCTACATCTATGAGCATCACGCAACGGAACAATTCATACCCATTTCCCTTGTCTTCAACTGCATCTATCAGGTTGTGGAAGTGATTTTTTATGGGCAACACCCTCGTCCTCTGCAATCTCTGAATTTGGAGGAGAAGAGTGAACTTTAG 384 0.4453 MASKRTFDEEDHQNNDDRDLQIRPKRRHGDPQEAEATHLSFLIASHLVPVVRNVKFGKVNRWDKIIAHAKDCEIDAYERYIYEHHATEQFIPISLVFNCIYQVVEVIFYGQHPRPLQSLNLEEKSEL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03606 127 MobiDBLite consensus disorder prediction 1 33 - -
Pumo5g03606 127 Pfam Calmodulin binding protein C-terminal domain 79 124 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03606 Pumo-Chr5 85523798 85525438 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03606 62 110 Calmodulin-binding Proteins AT5G26920 36.735 6.86e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03606 - - vra:106757360 93.5893