Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03604 ATGGCATCGAAGAGGACATTTGACGAGGAGGATCATCAGGGTAATGATGACAGAGATCTTCAAGGTCCCGCTAAGAGGAGACATGGCGACCCACAAGAAGCCGAGGCCATGCGCCTTGCGTTTCTTATCGCCTCTTGCTTGGTACCTGTAATTCGAAACGGGATTAAAGAGGAGATTCAATCTGTGCTCCAGGGTTACGCATGCCTGCGGGCTGGGCAAAGAAATATAACCCGACCGAAAACCGACATATCCGAAGCATTTTTTTTGTTTTGGTCGGTTTCGGGTGGATTTTTCGGATACATCGGGTTGTTTTTTCGGTTTCAAATGGATAGTATTGGTCGGAAATTCGGCAAGGTTAATGCATGGGACAAAATCATTGCACATGCTAAAGATTGTGAAATAGACGATTATGAGCGCTACATCTATGAGCATCAATTACCACCCGTTTCCCTTGTCTTCAACTGCATCTATGAGGTTGTCGAGGTGATGTTTTATGGGCAACACTCTCGTTCTCTGCAATCTCTGAATTTGGAGGAGAAGAGAGGAGAGAAATATGATGGATCAAAATAA 570 0.4491 MASKRTFDEEDHQGNDDRDLQGPAKRRHGDPQEAEAMRLAFLIASCLVPVIRNGIKEEIQSVLQGYACLRAGQRNITRPKTDISEAFFLFWSVSGGFFGYIGLFFRFQMDSIGRKFGKVNAWDKIIAHAKDCEIDDYERYIYEHQLPPVSLVFNCIYEVVEVMFYGQHSRSLQSLNLEEKRGEKYDGSK 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03604 189 MobiDBLite consensus disorder prediction 1 29 - -
Pumo5g03604 189 Pfam Calmodulin binding protein C-terminal domain 139 180 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03604 Pumo-Chr5 85480547 85490910 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03604 121 185 Calmodulin-binding Proteins AT5G26920 38.462 7.33e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03604 - - vra:106757360 95.9005