Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03593 ATGGTTGAACCAGGTACTGTAACTCCCATATCTGTTGCCTCATTTTCTTCCTCTGAAGATAACACCTTTCATATTCCTATCGGATCTTCCTCTCAACAAAATTCACCACCATCAAAGAAGACACGTGGTAGGCCCTTTGGCTCTAAGAACAAGCCAAAACTACCCCTCTTGATTAACCAAGACAATGAGCTTGCCCTAAAACCTATTTTCATTCAAATCCCTAAAAACTCTGATGTGATTGAGGCAGTGGTCCAATTTGCTCGTCGCTACCAAGTTAGCATTGAAGTGGGAAGTCAAAGTTTTTCTGGGATTGTTGGAGGGAAGGTTATTGCAGGAGATGATGTTACCGTGGTAGCTATTGTTCTCAAAGAACTTTGA 378 0.418 MVEPGTVTPISVASFSSSEDNTFHIPIGSSSQQNSPPSKKTRGRPFGSKNKPKLPLLINQDNELALKPIFIQIPKNSDVIEAVVQFARRYQVSIEVGSQSFSGIVGGKVIAGDDVTVVAIVLKEL 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03593 125 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 31 98 IPR014476 GO:0003680
Pumo5g03593 125 MobiDBLite consensus disorder prediction 21 53 - -
Pumo5g03593 125 MobiDBLite consensus disorder prediction 21 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03593 Pumo-Chr5 85421382 85421964 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03593 39 102 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 40.625 8.71e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03593 - - gmx:100795303 137.887