Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03590 ATGGTTTGCGAGGAAGAGTTGTTGATTGAAAAAGTGTGCGAGCTCTATGAACAAATCTCAAGCCTCGAGAGTCTCAAACCTTGCAAAAATGTCGACATGCTTTTCACCCAACTAGTCCTCACATGCATACCCCCTAGCCCAATCGATGTCACGAAACTAAACAAAACCGTTCAAGACATTCGATCCCACCTTATAAAACTATGTGGTGAAGCCGAGGGACATTTAGAGACTCACTACTCAAACATCCTAGGCTCATACGACAACCCCCTCGACCACCTTAATATTTTTCCCTATTATTCAAACTACCTCAAACTTGGTCTCCTTGAGTTCACTATCCTAAGCCAACACTGCACCCATGTTCCAACCAAAATTGCCTTCGTGGGTTCGGGACCTCTTCCTCTTACCTCGATTGTGTTGGCATCGAACCACTTACCCTCCACCACTTTCCACAACTATGACATGGACCCTTTAGCCAATTCCAATGCTATGCGCTTGGTTTCCTCTGACCCTGACTTGTCCAAGCGCATGGTTTTTCACACCAATGACATATTGGATGTGTCGAACGCTCTGAAGGAGTACGAGGTTGTTTACTTGGCAGCACTCGTGGGGATGGACAAGGAGGGGAAGAACCGAATCATTGATCACTTGGCCAAGCACATGAACCCTGGGGCACTTCTTATGCTGAGGAGTGCTCATGGGGCAAGGGCTTTTCTCTACCCTGTTGTTGAGCCTTGTGATCTTCGAGGCTTTGAGGTCCTCTCTGTGTTCCACCCCACCGATGAGGTCGTCAATTCGGTTGTCATAGCACGTAAATATCCTCTGCCTGTGCACCCTCTTGAGCAAGGACTTGGTTCCATCATCCTACCTAACAAGTGTTCCGAGATTCAAGCCTTCAACCCCCTCAACCATGGCAACATGATTGAAGAATTGGCCATTGAGGAGCAACTCTTGTGA 954 0.4759 MVCEEELLIEKVCELYEQISSLESLKPCKNVDMLFTQLVLTCIPPSPIDVTKLNKTVQDIRSHLIKLCGEAEGHLETHYSNILGSYDNPLDHLNIFPYYSNYLKLGLLEFTILSQHCTHVPTKIAFVGSGPLPLTSIVLASNHLPSTTFHNYDMDPLANSNAMRLVSSDPDLSKRMVFHTNDILDVSNALKEYEVVYLAALVGMDKEGKNRIIDHLAKHMNPGALLMLRSAHGARAFLYPVVEPCDLRGFEVLSVFHPTDEVVNSVVIARKYPLPVHPLEQGLGSIILPNKCSEIQAFNPLNHGNMIEELAIEEQLL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03590 317 Gene3D Vaccinia Virus protein VP39 6 273 IPR029063 -
Pumo5g03590 317 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Pumo5g03590 317 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Pumo5g03590 317 PANTHER NICOTIANAMINE SYNTHASE 3 4 295 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03590 Pumo-Chr5 85397177 85398440 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03590 1 314 Nicotianamine Synthase Gene Family AT5G04950 61.875 3.57e-140 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03590 K05953 - gmx:100803630 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03590 5 85397177 85398440 Pumo5g03590 5 85397177 85398440 ECH