Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03573 ATGGGGTCTGATCTTAATGCTGAATTATCCAAGAAAACTCCCATTTTTGGTCTCAAGGTTTGGGAAATATTTGGAATTGTAGTTGCATTGTCTATAATAGTCATTCTTTCTGTGGTCTCACTTTGCCTCACGTCAAGGAAGAAATCAAGAAAAGATAAAGACAGGATTCCCCTTAGTCAAATACCAACTGTCTCAAAGGAAATCAAGGAAGTGCGGGTTGAACAAGTGTCAACAAATGTGTTTGCTCCTCGTGATGGAATACTTGTTACAATTCAGGATAAGTCCAGTGACAAGGAATCAGACAAAGTCATGGTTCATTTAGGTGTGGGGAAGATGAAGAATGGGGATAGCAGCAATCACTCAGATTCATTTCGTTACATAGAGAAAGATGGAGGTGGTTCACACTCACAGTCAGGAGAAGAAGGTAGCTCTGGCACGGTTACAGTATACAAGCAATCTTCTTCATACCCTATAACAGCTCCCTCACCTCTATCTGGCCTTCCAGAATTCTCTCAATTGGGTTGGGGTCACTGGTTTACCTTGAGGGATCTTGAACTTGCCACAAACCGTTTTTCCAAAGAAAATGTCCTCGGTGAAGGCGGGTATGGAGTTGTTTATAGGGGACAGTTGATCAATGGAACTCCAGTGGCAGTTAAAAAGATACTCAATAACATTGGTCAAGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGCCATGTCCGACACAAAAACTTGGTTCGCCTTTTGGGGTACTGCATGGAGGGAACTCACAGGATGTTAGTTTATGAGTATGTCAATAATGGAAACTTAGAGCAATGGCTTCATGGAGCTATGCGTCACCATGGATACCTTACCTGGGAAGCACGTATCAAGATTCTCCTTGGCACAGCCAAAGCGCTAGCATATTTGCATGAAGCAATTGAACCAAAGGTGGTACACCGTGATATAAAGTCAAGCAACATATTAATTGATGATGATTTCAATGCCAAGGTTTCTGATTTTGGCCTGGCCAAGTTATTGGGTGCTGGGAAGAGTTATGTCACAACGCGAGTTATGGGAACTTTTGGCTATGAACTTTTCCCATGCTTGGTGAACCTGGTTGATTGGCTGAAAATGATGGTTGGAAACAGGAGATCAGAAGAAGTGGTGGACCCCAACATTGAGGTGAAGCCATCCACCAGAGCTTTAAAACGGGCTCTCTTAACTGCTTTAAGATGTGTAGATCCTGATTCTGAAAAAAGGCCCAAGATGGGCCAAGTTGTACGAATGCTGGAGTCAGAGGAATACCCTTTACCAAGAGAGGACCGAAGACACCGAAGAAGAAATCGAGGGGGTAGTGGAGAAATCGAGTCCCAGAAGGAATATTCTGACACAGACAGGAGTGAGATTCAGGATTCCAGAGAAGAAAGAAGAGGGTAA 1425 0.4323 MGSDLNAELSKKTPIFGLKVWEIFGIVVALSIIVILSVVSLCLTSRKKSRKDKDRIPLSQIPTVSKEIKEVRVEQVSTNVFAPRDGILVTIQDKSSDKESDKVMVHLGVGKMKNGDSSNHSDSFRYIEKDGGGSHSQSGEEGSSGTVTVYKQSSSYPITAPSPLSGLPEFSQLGWGHWFTLRDLELATNRFSKENVLGEGGYGVVYRGQLINGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCMEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSYVTTRVMGTFGYELFPCLVNLVDWLKMMVGNRRSEEVVDPNIEVKPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMLESEEYPLPREDRRHRRRNRGGSGEIESQKEYSDTDRSEIQDSREERRG 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03573 474 ProSiteProfiles Protein kinase domain profile. 191 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g03573 474 SUPERFAMILY Protein kinase-like (PK-like) 175 434 IPR011009 -
Pumo5g03573 474 FunFam Os07g0541700 protein 267 356 - -
Pumo5g03573 474 MobiDBLite consensus disorder prediction 111 147 - -
Pumo5g03573 474 Pfam Protein kinase domain 192 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g03573 474 ProSitePatterns Protein kinases ATP-binding region signature. 197 220 IPR017441 GO:0005524
Pumo5g03573 474 Gene3D Transferase(Phosphotransferase) domain 1 363 443 - -
Pumo5g03573 474 FunFam Putative receptor-like protein kinase 173 266 - -
Pumo5g03573 474 MobiDBLite consensus disorder prediction 425 474 - -
Pumo5g03573 474 SMART serkin_6 191 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g03573 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Pumo5g03573 474 Gene3D Transferase(Phosphotransferase) domain 1 267 362 - -
Pumo5g03573 474 PANTHER OS01G0323000 PROTEIN 4 359 - -
Pumo5g03573 474 Gene3D Phosphorylase Kinase; domain 1 171 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03573 Pumo-Chr5 85165493 85170663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03573 27 429 Trihelix Transcription Factor Family AT1G70460 34.382 1.18e-65 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pumo5g03573 Pkinase 2.8e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03573 - - gmx:100787014 824.698