Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03570 ATGGGCGGAGATGGAGCGACGGCGAACGCGGAGGCGCAGTACGCGACGGCGAAGATTTCGGTGTGGTGGGACATCGAGAACTGCCACGTGCCCAAGGGTTCGGATCCGCACGCGATCGCGCAGAACATCAGTTCCGCCCTCGTTCGCATGAACTACTGTGGCCCCGTCTCCATCTCCGCCTACGGTGACACCACGCGCATCCCCGCATCTGTACAGCACGCGCTCTCCAGCACCGGAATCTCCCTCAACCACGTCCCCGCCGGCGTGAAAGATGCAAGTGACAAGAAGATTCTTGTTGATATGCTGTTCTGGGCAGTGGACAATCCTGCACCTGCTAATTATTTACTAATTTCGGGTGACCGAGACTTTTCGAATGCTCTCCATCAACTTCGGATGAGGAGATATAATATTCTTCTTGCACAACCTCAGAAGGCATCTGCACCCCTAGTTGCAGCTGCCAAGAGTGTATGGCTTTGGACTAGCCTGTTAGCTGGAGGACCTCCTCTGTCTAATGGTGAATCGCAACAACTTGGTAATGGTAGCCTTAGCCATGTATCATCTTCTGACTCCTTACAAATTCCGGTTACAAGTGTTGCTCAGATACAGCAACAGGTGGATTCCTATTCAGAAGTTCATGTAGGAAATTCCAAATTTCCAAATGGAGGAAGGGGATTCGATTCTAGGTATCAGGGGAAAACAAATTGGAGAAACCCCAGTCAATCAAATGGACCCAGAGCCATGAATCCACCGCCAGTTGGACTTCAAGATAATCGTAATCGTAATAATACAAACTCTTATCGACCTGGCAACTTTAATCCAAATGTTCCGCTAAGTGGATCTGCTACAAATTATGTTCAGGGCAATACTGATCAGTTATGGAGCAATAACAGTAATCTACAGGGCAATCATCAAATTCCTTATTCACAGCCATTAAGACCAAACAACTTCCCATTGCAACCACCTTTTGCACCTAGTAATTCATATACTCCAAATTCCCATACTTTTGCAACTTCAATGGTGCCACCTAGGACTGGTGGTCCCAATTTCACTACAGGGCCACATACCAATGTGCCAGATATTGGTAATCTGAACATTTCTGGATACCCTAATAGTGTTCATAACCCACCTACTGTTCCGCAACGGAGTGGAGAGTTGAAACAGAATCCTAATGGTAATGCTCCGCATCTTTTAAGATCACTTGATGAAAAAAATGGACATATGGTACATAACAGTGGCACACAACAATTACACCAAGGTTATCAACATGGTCCAGAATATCAACCTACGCCGTTGGCAGCAATGGGTAATAATAACCCTTCTGGTAATGGTATGTGGGGTGCTCCAGGATGTCCTAAACCTTCTGAATATGTACAAGGCCTAATAGGGGTTGTTTTACTTGCCTTGAACTCACTAAAAAATGCAAAGATGATGCCAACTGAGGCAAATATAACTGATTGCATCCGGTATGGAGATCCCAAGCACCGCAACACTGATGTTAAGAAGGCTCTTGAAAGTGCTATTGAGCAGAATATGGTGGTGAAACAGAATTTAGGTGCTTTGCCGTTGTATGTTGGTAAGAATGATAAACTTTGGAAGTGTGTAAATCCTTTAGGTGGTAATCCTAAGCAGCACTCAAAAGAAACATGGGATGAAATTGAAAAGTTTTTATCAACTCCTGCTGGAAGATCAGCTCTAATGGCTACACAGTGCAAGTATGAAGCAGGTATTGTGATTAAGAATATGTGCTTTAAAGATCTTGCCTTGGGTGATGTCCTTCAGATATTGAACATGTTAATTACCCATAAAAAATGGATTGTGCATCATCCGTCTGGTTGGCAACCACTTAACATTACTCTTCCCGAGACAAACCCCGGTTCAGGGGTTGTAGCTGGCGCATAA 1899 0.4502 MGGDGATANAEAQYATAKISVWWDIENCHVPKGSDPHAIAQNISSALVRMNYCGPVSISAYGDTTRIPASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLSNGESQQLGNGSLSHVSSSDSLQIPVTSVAQIQQQVDSYSEVHVGNSKFPNGGRGFDSRYQGKTNWRNPSQSNGPRAMNPPPVGLQDNRNRNNTNSYRPGNFNPNVPLSGSATNYVQGNTDQLWSNNSNLQGNHQIPYSQPLRPNNFPLQPPFAPSNSYTPNSHTFATSMVPPRTGGPNFTTGPHTNVPDIGNLNISGYPNSVHNPPTVPQRSGELKQNPNGNAPHLLRSLDEKNGHMVHNSGTQQLHQGYQHGPEYQPTPLAAMGNNNPSGNGMWGAPGCPKPSEYVQGLIGVVLLALNSLKNAKMMPTEANITDCIRYGDPKHRNTDVKKALESAIEQNMVVKQNLGALPLYVGKNDKLWKCVNPLGGNPKQHSKETWDEIEKFLSTPAGRSALMATQCKYEAGIVIKNMCFKDLALGDVLQILNMLITHKKWIVHHPSGWQPLNITLPETNPGSGVVAGA 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03570 632 MobiDBLite consensus disorder prediction 373 398 - -
Pumo5g03570 632 MobiDBLite consensus disorder prediction 212 281 - -
Pumo5g03570 632 CDD PIN_limkain_b1_N_like 18 142 - -
Pumo5g03570 632 MobiDBLite consensus disorder prediction 373 394 - -
Pumo5g03570 632 Pfam OST-HTH Associated domain 569 618 IPR025677 -
Pumo5g03570 632 Pfam NYN domain 18 154 IPR021139 GO:0004540
Pumo5g03570 632 PANTHER LIMKAIN B LKAP 13 512 IPR024768 GO:0005777|GO:0010468
Pumo5g03570 632 Gene3D - 9 161 - -
Pumo5g03570 632 MobiDBLite consensus disorder prediction 254 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03570 Pumo-Chr5 85126395 85130707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03570 8 200 C2H2 Transcription Factor Family AT5G61190 70.466 2.02e-85 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03570 - - gmx:100794608 1259.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03570 5 85126395 85130707 Pumo5g03570 5 85126395 85130707 ECH