Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03569 ATGGATGGCGATTCAAAAGAGAAGGAGGGGTTGATGTTGAACATAGCGATCATGGTGGTATCCATGATCGCTATTGCAATGGTCACCGTTCATGTCTTTGCACACATTGATGACCCCAAACAAGACGCAGGGAATGTGAAGTCTCTTCTCTCCGTTTGCACCAAAACGGAGGAACCAGAAACCTGTGTCCGTGTGTTGAAACACGTAGGTGAGAGAGCCACGGTTTTGAATTACGTGAAAGCTGCTATTAATGCAACCCTCACAGAATTGTTGTTGGTGATTAGGCCAAAACCTCGTCTTGAAAGGAGCCTCACGAGTCTGCAGCAAGAGTCATATAGAGATTGTTTGGAACTGTTGAGTTTGGGAAAGGAAGAGTTAGAATATTCTTTGTATATGATGGCAAATTCTTATGTAGCAGAGTTGAGCCAACTAAACCTAGATGATTTGATGAACAGCCTAAGTGCTGTGATTTCGTACCAACACACTTGTTCTGATGAGTTAATGCGAATAAATAGCTATGAGGTTTTGGGGTATTCCTTGAAAGTTCCAATTGTTCTTACAAGGATAACTTTAGCCATTGTTAATAATTTCTCCGAGAGTGAGAGGCCTCCTAGCAGAGAAGCACCACAAACGATAGAAGCCTCTAGACGACAGCTAGAGGGATATCCAAGATCATGGTTCTCAGCAACACAGAGGAAAATGATAGAGTCTCAACAAGGAGATGATAATGGTCATCAATGGCCAATAGATGTAGTTGTGGCTCAAGATGGAAGTGGCCATTTCTCAACCATAGCTGACTCACTCAATGCATGTCCACAGAATAACACGATTGCGTGTATTATTTACGTGAAAAAAGGTAAATATGAGGAGAGGGTGGTGATTCCTAAGGGTGTAAACCAAGTGTTCATGTATGGTGATGGACCTGTGCATACCATTGTCACTGGTATCAACACGAGAGACCACAAGATACTCACAACCTCCTTTAGAGCAGCTACTTTCGTGGTAATGGGAAAAGGATTCGTCTGCAAAGACATGGGTTTCATTGCCCCAGCTGATATTACAGGAGCACCAGCACTCCTTGTCCTCTCTGATCATGCAGCATTCTTCAACTGCAAAATTGATGGTGAAGAAGGCAGCTTGTATGCAGTAGCCCAACGCCAATTCTACCGAGACTGTGAGATTCTTGGCAGTGTGGACATCATCAAGGGAGACTCTGCAACAGTAACTCAAAACTCACAAATCATTGTGAAGCCTCGAAATTCCTCTGATTTGATTTTCAGGAGAAATGTTGTGAGTGCACAGTCCAGGTTAGACAAGTATCAGACAACTGGGTTAGTGATCCAAAACTGCACCATCACAGCACAGGAAGAAGGCATCAATAATCTTACTGCTACCACTTACTTGGGCTCTCCATATAGTGAATATTCAAGAACAATCATAATGGAATCATTTCTAGGAGATGTGATACATCCAAAAGGTTGGTGTAAAAGGAGTGACAACTATGGCATTGAAACAGCAACCTTCAGGGAGTTTGATAATAGAGGGCCTGGGGCAAGAACTGAGAGGAGGGTCAAGTGGAATGGGTACAGTACAATTTTTGAGAGAGACCAAATGGTTAGTTACACAGTTGGTCGGTTTGTCCAAGCAGACCAGTGGTTGCTAAATACAGGCATTCCATACGAATCTGGGTTTGCTCTACAGAAATAG 1707 0.4312 MDGDSKEKEGLMLNIAIMVVSMIAIAMVTVHVFAHIDDPKQDAGNVKSLLSVCTKTEEPETCVRVLKHVGERATVLNYVKAAINATLTELLLVIRPKPRLERSLTSLQQESYRDCLELLSLGKEELEYSLYMMANSYVAELSQLNLDDLMNSLSAVISYQHTCSDELMRINSYEVLGYSLKVPIVLTRITLAIVNNFSESERPPSREAPQTIEASRRQLEGYPRSWFSATQRKMIESQQGDDNGHQWPIDVVVAQDGSGHFSTIADSLNACPQNNTIACIIYVKKGKYEERVVIPKGVNQVFMYGDGPVHTIVTGINTRDHKILTTSFRAATFVVMGKGFVCKDMGFIAPADITGAPALLVLSDHAAFFNCKIDGEEGSLYAVAQRQFYRDCEILGSVDIIKGDSATVTQNSQIIVKPRNSSDLIFRRNVVSAQSRLDKYQTTGLVIQNCTITAQEEGINNLTATTYLGSPYSEYSRTIIMESFLGDVIHPKGWCKRSDNYGIETATFREFDNRGPGARTERRVKWNGYSTIFERDQMVSYTVGRFVQADQWLLNTGIPYESGFALQK 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03569 568 PANTHER PECTINESTERASE 23 554 - -
Pumo5g03569 568 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 197 IPR035513 -
Pumo5g03569 568 SMART PMEI_2 44 193 IPR006501 GO:0004857
Pumo5g03569 568 FunFam Pectinesterase 249 560 - -
Pumo5g03569 568 Pfam Pectinesterase 250 550 IPR000070 GO:0030599|GO:0042545
Pumo5g03569 568 SUPERFAMILY Pectin lyase-like 247 562 IPR011050 -
Pumo5g03569 568 Gene3D - 249 566 IPR012334 -
Pumo5g03569 568 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 51 198 IPR035513 -
Pumo5g03569 568 CDD PMEI-like_3 51 198 - -
Pumo5g03569 568 Pfam Plant invertase/pectin methylesterase inhibitor 51 167 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03569 Pumo-Chr5 85121964 85124194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03569 47 564 Carbohydrate Esterase AT2G26450 36.842 5.84e-90 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03569 K01051 - gmx:102665007 910.212