Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03561 ATGGCGAGAGTTTTGTGGGTTGGCATTGCTATAGGACTTGTTTTCTTCAGCAACTGGGTTGATGGGTTCGTAGGATATGAACATCATTTCAATGAAACAGAGTTGTCTTTATTAGAGGCTCATGAAGCTTCCTTATCCTATTCCTACTCCGGAACCGGGAGGAATAATCTTCTGCTGGTAGGACTCACCCTTATTCAGAATGCTGCTGCTAAAGGAGCAGTCTGCTTGGATGGAACATTACCTGGTTATCATTTGCATAGGGGATATGGATCAGGAGCAAATAGCTGGCTTATTAATTTAGAGGGTGGTGGATGGTGTAATAATATCAGAACATGTGTTTATCGCAAGAAAACCCGGCGTGGATCATCAGATTTCATGGAAAAGGAGATACCTTTTACAGGAATATTAAGTAACAAGGCTGAAGAAAATCCAGATTTTTTCAATTGGAATAGAGTAAAGCTTCGTTATTGTGATGGTGCCTCATTTTCTGGGGATAGTGAAGATGAGACTGCAGAACTGCAATTCAGAGGACAACGTATTTGGGCAGCTGCAATGGAAGATTTGATGTCAAAGGGAATGCGTTTTGCCAATCAGGCTCTTCTTTCGGGATGCTCCGCGGGTGGCCTGGCTACTATTATTCACTGTGATGAATTTCGTGGTCTCTTTCCAAGGACCACCAAAGTGAAATGTCTTAGTGATGCTGGGCTGTTTCTTGATGCGATTGATGTATCTGGTGGGCATACCCTCAGGAATTTATACAGTGGTGTTGTAGGATTGCAGGGAGCGCAGAAGAATCTGCCACAAATTTGTACTAATCACCTTGATCCCATTTCGTGCTTCTTTCCTCAAAACTTGATTGCCAGTGTTAGGACCCCGCTATTCATTCTTAATGCCGCTTATGATTCATGGCAGATCCAGTCCAGTTTAGCTCCTCCATCTGCAGATCCCCATGGCTATTGGCATGAATGTAGATTAAACCATGCTAAATGTACTAGATCACAAATCCAATTTCTGCAAGGATTCAGGAATCACATGCTGAATGCTATTAAAGACTTCTCAAGATCAAACCGGAATGGCTTGTTTATTAATTCATGTTTTTCTCACTGCCAAACTGAGAGGCAGGATACATGGTTTGCTGACAATTCTCCTGTTATTAGGAACAAGGCAATTGCTCTGGCTGTTGGAGACTGGTATTTCGATCGAGCAGGTGTTAAGGCCATTGATTGTCCTTACCCTTGTGATAATACGTGCCATCATCTGATTTTCAGATGA 1272 0.4253 MARVLWVGIAIGLVFFSNWVDGFVGYEHHFNETELSLLEAHEASLSYSYSGTGRNNLLLVGLTLIQNAAAKGAVCLDGTLPGYHLHRGYGSGANSWLINLEGGGWCNNIRTCVYRKKTRRGSSDFMEKEIPFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDSEDETAELQFRGQRIWAAAMEDLMSKGMRFANQALLSGCSAGGLATIIHCDEFRGLFPRTTKVKCLSDAGLFLDAIDVSGGHTLRNLYSGVVGLQGAQKNLPQICTNHLDPISCFFPQNLIASVRTPLFILNAAYDSWQIQSSLAPPSADPHGYWHECRLNHAKCTRSQIQFLQGFRNHMLNAIKDFSRSNRNGLFINSCFSHCQTERQDTWFADNSPVIRNKAIALAVGDWYFDRAGVKAIDCPYPCDNTCHHLIFR 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03561 423 Pfam Pectinacetylesterase 58 402 IPR004963 GO:0016787
Pumo5g03561 423 PANTHER NOTUM-RELATED 58 419 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03561 Pumo-Chr5 85003808 85008458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03561 1 423 Carbohydrate Esterase AT1G57590 67.139 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03561 K19882 - gmx:100782401 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03561 5 85003808 85008458 Pumo3g02104 3 32722460 32727023 ECH
Pumo5g03561 5 85003808 85008458 Pumo5g03561 5 85003808 85008458 ECH
Pumo3g02104 3 32722460 32727023 Pumo5g03561 5 85003808 85008458 ECH
Pumo4g00559 4 7381218 7387225 Pumo5g03561 5 85003808 85008458 ECH
Pumo5g03561 5 85003808 85008458 Pumo3g02081 3 32518054 32523245 PCT