Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03537 ATGAGAATGAAGGTGATTCAAATAGTAGCATTTACCTTTGTCTCTGTGTTTATGAACGCTAGATCTGAGGCTGAGCATTTGTTTGAAAACGATGGCGTTTCACTGGCAGAAACGACCGGACCTCCACCTCTCATGGTCCCCCTCACTCTTATTCAGGGAGCTGCTTCCAAAGGAGCCGTCTGTTTGGATGGAACATTGCCTGGTTACCACTTTCATCCTGGATTTGGATCTGGGGCAAATAGTTGGCTCATTCAATTGGAGGGAGGAGGATGGTGTAATACCATCAAAAGTTGTGTCTTTAGAAAAACTACCCGTCGTGGTTCCTCAAAATACATGGAAAAGCAACTAGCATTCACGGGGATATTGAGCAATAAAGCTGAAGAAAACCCTGATTTCTTTAACTGGAACAGAGTTAAAGTACGGTACTGTGATGGGGCATCTTTCAGTGGAGATAGTCAAAACGAGGCTGCACAACTTCAATTCCGAGGACAAAAAATATGGCAAGCTGCAATGGAGGAATTATTGTTCAGGGGAATGCAGAAGGCCAACCAGGCTCTTTTGTCTGGATGCTCTGCAGGTGGTTTGGCATCTATAATTCATTGTGATGAGTTCCGGAGCTTGTTTCCTACGTATACCAAAGTGAAATGTTTGAGTGATGCAGGGTTTTTCCTAGATGCAGTTGATGTATCTGGGGGTCACACACTGAGGAATCTGTTTGGAGGTGTAGTTAACTTACAGGAGGTGCAAAAAAATCTGCCAAGAAGTTGTCTCAACCAACTGGACCCAACTTCGTGCTTTTTTCCTCAGAATTTGATCAACCATGTTGAGACTCCATTGTTTCTACTCAATGCAGCTTATGATGCATGGCAGGTCCAAGAAAGTTTGGCCCCACCTTCAGCAGATCCCCGTGGCTCTTGGCATGATTGTAAATCAAATCATGCACACTGTAACTCATCTCAAATTCAGTTCCTCCAAGACTTCAGAAATCAAATGCTAAATGACGTGAGAGGCTTCTCAGGGACATCTCAAACTGGGTTATTCATAAATTCTTGTTTTGCTCATTGCCAGTCTGAGAGACAAGATACATGGTTTGCTGATGACTCTCCGCTCATTAACAACATGCCAATTGCAATTGCTGTTGGAGACTGGTATTTTGATCGGAAAACTGTCAAAGCTATCGACTGTGCTTACCCCTGTGACAATACCTGCCATAATCTGGTCTTCAATGCTGGTAAATCTGCTGTGGTGGACTACCAGTCCACAAGTGATGATGACACACCTCCCAATACCATGACCATGATATATTCCCGGTCCACGAGGCTGACTTTTAGTACTGGCCTATATATGCTAAGTGTTTTATTGCCAATTACATGTTCCTAG 1380 0.437 MRMKVIQIVAFTFVSVFMNARSEAEHLFENDGVSLAETTGPPPLMVPLTLIQGAASKGAVCLDGTLPGYHFHPGFGSGANSWLIQLEGGGWCNTIKSCVFRKTTRRGSSKYMEKQLAFTGILSNKAEENPDFFNWNRVKVRYCDGASFSGDSQNEAAQLQFRGQKIWQAAMEELLFRGMQKANQALLSGCSAGGLASIIHCDEFRSLFPTYTKVKCLSDAGFFLDAVDVSGGHTLRNLFGGVVNLQEVQKNLPRSCLNQLDPTSCFFPQNLINHVETPLFLLNAAYDAWQVQESLAPPSADPRGSWHDCKSNHAHCNSSQIQFLQDFRNQMLNDVRGFSGTSQTGLFINSCFAHCQSERQDTWFADDSPLINNMPIAIAVGDWYFDRKTVKAIDCAYPCDNTCHNLVFNAGKSAVVDYQSTSDDDTPPNTMTMIYSRSTRLTFSTGLYMLSVLLPITCS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03537 459 PANTHER NOTUM-RELATED 33 405 IPR004963 GO:0016787
Pumo5g03537 459 Pfam Pectinacetylesterase 44 389 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03537 Pumo-Chr5 84661447 84668643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03537 30 409 Carbohydrate Esterase AT2G46930 72.468 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03537 K19882 - gmx:100785270 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03537 5 84661447 84668643 Pumo3g02104 3 32722460 32727023 PCT