Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03522 ATGGCAATGTGTGTGATAAGAACAAAAGGAGGCCTAGTTAAGGCAGCAGAGGAGACTCCCTTGACCACACTAGACCTATCAGCGATAGATAGGTTACCTGTTCTAAGATGCAATGCCAGAACCTTACACGTGTTCAAACACGGTCCTGAAGCTGCAAGGGTCATAAGAGAGGCATTGTCCAAAGCACTGGTTCCATATTACCCTCTTGCAGGACGACTCACAGAATCCCAACCAGGGTGCCTCCAAATTGAATGCTCAGGTGACGGCGTGTGGTATGTCGAGGCTTCTTCTGATTGCACCCTTCACTCTGTCAATTTCTTTGATGATGTTCAGTCTATCCCATATGATGATCTTCTTCCTGATGGTGTTCCTGAGAGCCAACGCATCCACCCCCTCGTTCAAATGCAGGTGACACAATTTGGTTGCGGTGGTTTTGTGATAGGCCTCATATTCTGCCATAGCATATGTGATGGTCTTGGTGCTGCACAGTTTCTAAACGCAATCGGGGAACTAGCAAGGGGTCTTGAGAAACCCAGTATTGAACCAGTGTGGCACAGAGACTTCTTTCCATCTCCTCAAACACCCCAAGAAACTGCATTGCCACCAATACCACCCCCTCCTCCTCAAATGCCAATGCCAGACTACAAGCTAGAACATGCCAACATAGACATGCCCATGGATCAAGTCAACCGTGTGAAGCGAGAATTTCAACAAGCAACTGGGCTGAGTTGCTCAGCCTTCGAGATTGTAGCTGCAGCGTGTTGGGCCACCCGAACAAAGGCCATTCAATTCGAGCCCAATACGGAATTGAAGTTGGTGTTCTTTGCAAATTGCCGTCATCTCTTGGACCCTCCCCTGCCCAATGGTTTCTACGGCAATTGTTTCTTCCCAGTGATGATCACAGCTTCGTGTGAGTCACTTAGAAATGCAACAACGGTTGGTGTGGTGAAGCTGATACAAGAAGCCAAGGCCAAGTTACCCGTGGAATTTGGCAAGTACTTGAAGGGTGAGCATTTGAAAAAATGCGGAGAGGATCCCTTTGCACCTCCACTCACCTACACCACTCTGTTTATATCTGAGTGGGGGAGGTTGGGGTTCAACCACGTGGACTACCAGTGGGGCCCGCCCGTCCACGTGGTTCCCATTCAAGGATCCAGCATCATACCTGTGGCCATTGTGGGGTCCCTGCCTCTCCCCAACAAAGGGATTCGTTTGATGACGTGGTGCGTGGAGGAGGCACATCGCCTTCCTTTCCTTTATCATATGCATGGTGTCATGAATCAGGAAGCAGAAGAATGA 1299 0.4935 MAMCVIRTKGGLVKAAEETPLTTLDLSAIDRLPVLRCNARTLHVFKHGPEAARVIREALSKALVPYYPLAGRLTESQPGCLQIECSGDGVWYVEASSDCTLHSVNFFDDVQSIPYDDLLPDGVPESQRIHPLVQMQVTQFGCGGFVIGLIFCHSICDGLGAAQFLNAIGELARGLEKPSIEPVWHRDFFPSPQTPQETALPPIPPPPPQMPMPDYKLEHANIDMPMDQVNRVKREFQQATGLSCSAFEIVAAACWATRTKAIQFEPNTELKLVFFANCRHLLDPPLPNGFYGNCFFPVMITASCESLRNATTVGVVKLIQEAKAKLPVEFGKYLKGEHLKKCGEDPFAPPLTYTTLFISEWGRLGFNHVDYQWGPPVHVVPIQGSSIIPVAIVGSLPLPNKGIRLMTWCVEEAHRLPFLYHMHGVMNQEAEE 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03522 432 Gene3D - 203 413 IPR023213 -
Pumo5g03522 432 Gene3D - 2 201 IPR023213 -
Pumo5g03522 432 PANTHER ACYL TRANSFERASE 4 4 423 - -
Pumo5g03522 432 Pfam Transferase family 9 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03522 Pumo-Chr5 84441112 84443193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03522 12 388 Monolignol Biosynthesis Gene Families AT5G48930 28.224 8.17e-38 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03522 - - gmx:100783128 764.607