Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo5g03512 | ATGAGTTGTTTCAGCTGTTGTGAGGAAGATGACTACCAGAAGACTGCTGAAAGTGGAGGACAGCATGTGGTAAAAAACTCAACAGGAAATGATGGAAATGGTCGTGCATCCGAAACTGCAAAGCAGGGCACTCAAGCTGTTAAAATTCAGCCCATTGAAGTTCCTGAATTACCAGTGGATGAACTCAAAGAAATTACAGATGGCTTTGGAGAAGGTTCTTTGATTGGAGAGGGATCCTATGGAAGAGTATATTATGGTGTTCTGAAAAGTGGGCAGGCTGCTGCCATCAAGAAATTAGATGCCAGTAAACAGCCTGATGACGAATTTTTAGCCCAGGTTTCAATGGTTTCACGGCTGAAGCATGACAATTTTGTTCAATTGCTTGGTTATTGCATTGATGGAAACTCCCGAGTTCTTGCTTATGAGTTTGCATCTAATGGGTCTCTTCATGATATTTTACATGGCAGAAAAGGTGTTAAAGGAGCACAGCCTGGTCCTGTTCTAACATGGACTCAGAGAGTTAAAATTGCTGTAGGGGCTGCCAAGGGGCTTGAGTACTTGCATGAGAGGGCTGATCCCCACATTATCCACCGGGACATCAAGTCAAGCAATGTACTAATCTTTGATGACGATGTTGCTAAAATTGCAGATTTTGATTTGTCAAATCAGGCTCCTGACATGGCAGCACGTCTCCATTCCACTCGTGTCCTTGGAACCTTTGGTTATCATGCACCAGAATATGCAATGACTGGTCAATTGAATGCTAAGAGTGATGTGTACAGCTTTGGTGTTGTCCTTCTGGAACTTTTGACTGGAAGGAAGCCTGTTGATCATACACTACCACGTGGGCAGCAGAGCCTGGTTACTTGGGCTACACCAAGACTCAGTGAGGATAAAGTCAGACAGTGTGTAGATGCAAGACTAGGGGGAGATTACCCGCCCAAAGCTGTTGCTAAGGTATTCACTGTGTTTTAG | 975 | 0.4421 | MSCFSCCEEDDYQKTAESGGQHVVKNSTGNDGNGRASETAKQGTQAVKIQPIEVPELPVDELKEITDGFGEGSLIGEGSYGRVYYGVLKSGQAAAIKKLDASKQPDDEFLAQVSMVSRLKHDNFVQLLGYCIDGNSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLTWTQRVKIAVGAAKGLEYLHERADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDKVRQCVDARLGGDYPPKAVAKVFTVF | 324 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo5g03512 | 324 | SUPERFAMILY | Protein kinase-like (PK-like) | 48 | 319 | IPR011009 | - | |
Pumo5g03512 | 324 | ProSitePatterns | Protein kinases ATP-binding region signature. | 75 | 98 | IPR017441 | GO:0005524 | |
Pumo5g03512 | 324 | Gene3D | Phosphorylase Kinase; domain 1 | 30 | 143 | - | - | |
Pumo5g03512 | 324 | MobiDBLite | consensus disorder prediction | 19 | 45 | - | - | |
Pumo5g03512 | 324 | Pfam | Protein tyrosine and serine/threonine kinase | 73 | 279 | IPR001245 | GO:0004672|GO:0006468 | |
Pumo5g03512 | 324 | FunFam | PTI1-like tyrosine-protein kinase 3 | 33 | 143 | - | - | |
Pumo5g03512 | 324 | PANTHER | PTO-INTERACTING PROTEIN 1-LIKE | 4 | 323 | - | - | |
Pumo5g03512 | 324 | SMART | serkin_6 | 69 | 322 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo5g03512 | 324 | MobiDBLite | consensus disorder prediction | 17 | 45 | - | - | |
Pumo5g03512 | 324 | FunFam | pto-interacting protein 1 | 145 | 324 | - | - | |
Pumo5g03512 | 324 | Gene3D | Transferase(Phosphotransferase) domain 1 | 144 | 324 | - | - | |
Pumo5g03512 | 324 | ProSiteProfiles | Protein kinase domain profile. | 69 | 324 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo5g03512 | 324 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 195 | 207 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo5g03512 | Pumo-Chr5 | 84352302 | 84355534 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo5g03512 | 57 | 323 | Receptor kinase-like Gene Family | AT4G02010 | 51.292 | 4.48e-83 | 264 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIII | Pumo5g03512 | PK_Tyr_Ser-Thr | 6.1e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo5g03512 | K13436 | - | gmx:100499642 | 635.565 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pumo3g02130 | 3 | 33012078 | 33014767 | Pumo5g03512 | 5 | 84352302 | 84355534 | PCT |