Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03512 ATGAGTTGTTTCAGCTGTTGTGAGGAAGATGACTACCAGAAGACTGCTGAAAGTGGAGGACAGCATGTGGTAAAAAACTCAACAGGAAATGATGGAAATGGTCGTGCATCCGAAACTGCAAAGCAGGGCACTCAAGCTGTTAAAATTCAGCCCATTGAAGTTCCTGAATTACCAGTGGATGAACTCAAAGAAATTACAGATGGCTTTGGAGAAGGTTCTTTGATTGGAGAGGGATCCTATGGAAGAGTATATTATGGTGTTCTGAAAAGTGGGCAGGCTGCTGCCATCAAGAAATTAGATGCCAGTAAACAGCCTGATGACGAATTTTTAGCCCAGGTTTCAATGGTTTCACGGCTGAAGCATGACAATTTTGTTCAATTGCTTGGTTATTGCATTGATGGAAACTCCCGAGTTCTTGCTTATGAGTTTGCATCTAATGGGTCTCTTCATGATATTTTACATGGCAGAAAAGGTGTTAAAGGAGCACAGCCTGGTCCTGTTCTAACATGGACTCAGAGAGTTAAAATTGCTGTAGGGGCTGCCAAGGGGCTTGAGTACTTGCATGAGAGGGCTGATCCCCACATTATCCACCGGGACATCAAGTCAAGCAATGTACTAATCTTTGATGACGATGTTGCTAAAATTGCAGATTTTGATTTGTCAAATCAGGCTCCTGACATGGCAGCACGTCTCCATTCCACTCGTGTCCTTGGAACCTTTGGTTATCATGCACCAGAATATGCAATGACTGGTCAATTGAATGCTAAGAGTGATGTGTACAGCTTTGGTGTTGTCCTTCTGGAACTTTTGACTGGAAGGAAGCCTGTTGATCATACACTACCACGTGGGCAGCAGAGCCTGGTTACTTGGGCTACACCAAGACTCAGTGAGGATAAAGTCAGACAGTGTGTAGATGCAAGACTAGGGGGAGATTACCCGCCCAAAGCTGTTGCTAAGGTATTCACTGTGTTTTAG 975 0.4421 MSCFSCCEEDDYQKTAESGGQHVVKNSTGNDGNGRASETAKQGTQAVKIQPIEVPELPVDELKEITDGFGEGSLIGEGSYGRVYYGVLKSGQAAAIKKLDASKQPDDEFLAQVSMVSRLKHDNFVQLLGYCIDGNSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLTWTQRVKIAVGAAKGLEYLHERADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDKVRQCVDARLGGDYPPKAVAKVFTVF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03512 324 SUPERFAMILY Protein kinase-like (PK-like) 48 319 IPR011009 -
Pumo5g03512 324 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Pumo5g03512 324 Gene3D Phosphorylase Kinase; domain 1 30 143 - -
Pumo5g03512 324 MobiDBLite consensus disorder prediction 19 45 - -
Pumo5g03512 324 Pfam Protein tyrosine and serine/threonine kinase 73 279 IPR001245 GO:0004672|GO:0006468
Pumo5g03512 324 FunFam PTI1-like tyrosine-protein kinase 3 33 143 - -
Pumo5g03512 324 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 4 323 - -
Pumo5g03512 324 SMART serkin_6 69 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g03512 324 MobiDBLite consensus disorder prediction 17 45 - -
Pumo5g03512 324 FunFam pto-interacting protein 1 145 324 - -
Pumo5g03512 324 Gene3D Transferase(Phosphotransferase) domain 1 144 324 - -
Pumo5g03512 324 ProSiteProfiles Protein kinase domain profile. 69 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g03512 324 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03512 Pumo-Chr5 84352302 84355534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03512 57 323 Receptor kinase-like Gene Family AT4G02010 51.292 4.48e-83 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pumo5g03512 PK_Tyr_Ser-Thr 6.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03512 K13436 - gmx:100499642 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02130 3 33012078 33014767 Pumo5g03512 5 84352302 84355534 PCT