LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo5g03506	ATGGACGACTGTTGTGCCGTTTGCGCTGAGCCTTTGGAATGGGTTGCGTACGGACCCTGTTTGCACCGGGAGGTGTGTTCCACCTGCGTCGCTCGTCTCCGTTTCATCTGCGACGATCGCCGTTGCTGCATCTGCAAGACCGAATGCAACCTCGTATTCGTCACCAAGGCTCTAGGTGATTATACGAGGATGATCAATGATTTTTCGGCCCTTCCTTCGGAGGTGAGGGAGGGCAAGGTTGGATCATATTGGTACCATGAGGATACAAATGCATTTTTTGATGATGTGGACCATTACAAGATGATCAAGGCTATGTGCAGGCTTTCGTGCAGTGTATGTGACAAGATGGAGGAGCAACCACAGGATGCTGCTTCAAGGCGGCGAGCAAAGTTTAGGAATATAGGGCAGTTGAAGGGTCATTTATTCCACCGTCATAAGTTGCATATGTGCAGTTTGTGTTTAGAGGGAAGGAAGGTTTTTATATGTGAGCAAAAACTATATACCAAACCACAGTTGAATCAACACATACTCACAGGTGATTCTGAGGTGGATGGAAGTGAGAGTGAGAGAGGCGGTTTCATGGGGCATCCCATGTGCGAATTCTGCAGAACCCCATTTTATGGAGACAATGAATTATACATGCATATGTCTACAGAACATTATACTTGTCATATATGCCAAAGGCAGCATCCAGGGCAGTATGAGTACTATAAGAATTATGATGACCTAGAGATCCACTTCCGTCAAGAGCACTTCTTATGTGAAGATGAGGCTTGCCTTGCTAAGAAATTTGTTGTTTTTCAATCTGAAGCAGAGATGAAGAGGCATAATGCTATCGAACATGGAGGGCGGATGTCACGGTCTAAGCGTAATGCTGCTCTTCAGATACCAACTAGCTTCCGATACAGACATGGTAATGAACATGAGCAACGCCGTGGAAGAGGTCGTACGTTTCGTCGTGATGTTTCTGAAAATCAACTTTCTATGGCCATTGAAGCTAGTTTGGAAACAGCTAATGCAGAGCAAACATCTCGTGATCAATCGACATCAAGTAGTGGGCAAGTTGCTGTTGATGATGGGAATGATGATATTGATTCTCTCATTCAGCCATTTGAATCATTAGCTGCAGCAGGTTCTGAATCATCTGCAAGATACCTTCAAGCCTTGGGGCATAGCTCTAGGAATGGACCTCTGGTAGATTCTTCCTTTCCACCACTACCCATAACTTCCAGCAATGGCCAGCAAAGGTCCAAACATGAACTGGAAGGTTCATCTAGTAACACTATGGCTGCACGTCTGCGTCGGCATGGCAACAGAACTGTATCCGTTATTAATTCTGGTAATGCGTGGCCAGCAGCAGGTCGTGGACTGGCACAATCATCAAGTAATCCTTCACAATCTAAACTGTCAACAAATAATGTTCTTGGACTTTCTCGTAACACAGGGCAGATGAGAACAGTAATTAACAGTGGACCGTCATCATCAACTTATGCTGGTTTTATTCAGGCTACACAGAGAACTGCTCATGGACAATTACCTGCTGGTTCATCGAGGGACACACGTGACAATGTCAGAATTGTTCACTCTGCATCTGCTCCAAATCTCATGGAGAACAACTCTGTTGAAGTTTCAATTTCTGATTTTCCTCCAGTTTCTGCTGCACAAGTGAGTAAGTTACCTGCTAGCAGCCAGTCTTCATTGAACGCGGAAAATGTTCAGTCTGCTAACAAGTCTTTGGTTGAAAAGATTCGTGGTGCTCTTGATTTTGATGAAGAAAGATACACTATATTTAAAGACATATCTGCCCAATATCGCCAAGGCACTATAGATACAGGTACATATCTGGACTATGTGCAGCAGTTTGGCTTGTCTCATCTTGTGCTTGAGTTGGCAAGACTATGCCCGGATACTCAGAAGCAGAAAGAGCTTGTTGAGGCTTACAACACTAGTTTGCAAAGAGATGCTTTCCCAGAAAATAACTTGGTTCGAGGCAGCGCTAGCACCCATCGCAAAGGCAGTAATGTAAACAAGAAAGGTAAAGGTAAGTCTGTAGACAGTAAGGGGAGTAACTCCACAGATAAATTAGCAGATAGCTTTTTAAGCACTGTACATCAGCTACAGACAAATTATAAATCTTCAGAAGAGAAGGTGGAAGTGCTATCAAGGGGTGATTACCGCAGTGACACAGGCAAATTAAAAATCAAGCAGCGGATTGATACAAATTCTGGTAGTCAACCTACAATGAAGCTTGGTGGGCAGACTGAAACATCAAATAGCAGTTTATCTAATCAAAATAAAGAGGATGGGGGTGGTGGGAACAAGCAACGCAAAAAAACTTCTAAATTCCTGAGAGTGCGCCTTGGTGATGGTTCTGCTTCAGACCTTCTTGATCAATCAGATCCTGGAACAACAGACAGCTCAGAAGGTAACAAGGATGACTCTGGAGGAGGGCCTCCTGTGCGAGGTGTTTGGCGAAATGGGGGAGGTCATAAACTTTTTCCCTAA	2505	0.4431	MDDCCAVCAEPLEWVAYGPCLHREVCSTCVARLRFICDDRRCCICKTECNLVFVTKALGDYTRMINDFSALPSEVREGKVGSYWYHEDTNAFFDDVDHYKMIKAMCRLSCSVCDKMEEQPQDAASRRRAKFRNIGQLKGHLFHRHKLHMCSLCLEGRKVFICEQKLYTKPQLNQHILTGDSEVDGSESERGGFMGHPMCEFCRTPFYGDNELYMHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRQEHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRSKRNAALQIPTSFRYRHGNEHEQRRGRGRTFRRDVSENQLSMAIEASLETANAEQTSRDQSTSSSGQVAVDDGNDDIDSLIQPFESLAAAGSESSARYLQALGHSSRNGPLVDSSFPPLPITSSNGQQRSKHELEGSSSNTMAARLRRHGNRTVSVINSGNAWPAAGRGLAQSSSNPSQSKLSTNNVLGLSRNTGQMRTVINSGPSSSTYAGFIQATQRTAHGQLPAGSSRDTRDNVRIVHSASAPNLMENNSVEVSISDFPPVSAAQVSKLPASSQSSLNAENVQSANKSLVEKIRGALDFDEERYTIFKDISAQYRQGTIDTGTYLDYVQQFGLSHLVLELARLCPDTQKQKELVEAYNTSLQRDAFPENNLVRGSASTHRKGSNVNKKGKGKSVDSKGSNSTDKLADSFLSTVHQLQTNYKSSEEKVEVLSRGDYRSDTGKLKIKQRIDTNSGSQPTMKLGGQTETSNSSLSNQNKEDGGGGNKQRKKTSKFLRVRLGDGSASDLLDQSDPGTTDSSEGNKDDSGGGPPVRGVWRNGGGHKLFP	834

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo5g03506	834	MobiDBLite	consensus disorder prediction	303	322	-	-
	Pumo5g03506	834	MobiDBLite	consensus disorder prediction	736	769	-	-
	Pumo5g03506	834	PANTHER	ZINC FINGER PROTEIN 598	1	737	IPR044288	GO:0061630\|GO:0072344
	Pumo5g03506	834	ProSiteProfiles	Zinc finger RING-type profile.	5	46	IPR001841	-
	Pumo5g03506	834	SMART	c2h2final6	221	251	IPR013087	-
	Pumo5g03506	834	SMART	c2h2final6	108	145	IPR013087	-
	Pumo5g03506	834	SMART	c2h2final6	197	220	IPR013087	-
	Pumo5g03506	834	SMART	c2h2final6	252	281	IPR013087	-
	Pumo5g03506	834	MobiDBLite	consensus disorder prediction	796	811	-	-
	Pumo5g03506	834	MobiDBLite	consensus disorder prediction	303	321	-	-
	Pumo5g03506	834	MobiDBLite	consensus disorder prediction	336	357	-	-
	Pumo5g03506	834	MobiDBLite	consensus disorder prediction	731	834	-	-
	Pumo5g03506	834	MobiDBLite	consensus disorder prediction	660	692	-	-
	Pumo5g03506	834	MobiDBLite	consensus disorder prediction	336	364	-	-
	Pumo5g03506	834	CDD	RING-HC_ZNF598	3	54	IPR041888	-
	Pumo5g03506	834	MobiDBLite	consensus disorder prediction	453	472	-	-
	Pumo5g03506	834	MobiDBLite	consensus disorder prediction	396	428	-	-
	Pumo5g03506	834	MobiDBLite	consensus disorder prediction	455	472	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo5g03506	1	833	C2H2 Transcription Factor Family	AT3G62240	52.625	0.0	835

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo5g03506	K22381		-	gmx:100780426	1552.34

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo5g03506	5	84317511	84321367	Pumo5g03506	5	84317511	84321367	ECH