Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03494 ATGGAAGAAACATTTGTACCCTTTGAAGGAATCAAGAATGATCTGAGAGGAAGGTTGATGTGCTACAAGCAAGATTGGTTGGGTGGAATCAGAGCAGGTTTAAGGATTTGGGCCCCCACCACATACATATTCTTTGCTTCCGCAATACCAGTCATTTCATTCGGGGAACAACTAGAGCGAGATACTGATGGTGTTCTAACTGCTGTTCAAACATTGGCATCCACTTCAGTATGTGGCATTATACACTCAATCCTTGGAGGTCAACCTTTGCTAATTTTAGGAGTGGCAGAACCTACCGTGATCATGTACACATTCATGTTCAATTTTGCAAAAGAGAGACCAGAGTTGGGCCGGGATTTGTTTCTGGCATGGACTGGATGGGTATGTGTCTGGACTGCACTGTTGCTATTCTTACTGGCCATCTTAGGGGCTTGCTCTATAATCAACAGGTTTACCCGTATTGCAGGAGAGTTGTTTGGCCTGCTTATTGCAATGCTCTTCATGCAGCAAGCTATCAAAGGACTAGTGGATGAGTTTCGCATACCAGGGAGACAAAATCCAAAATCAATTGAGTTTATACCTTCATGGAGGTTTGCTAATGGGATGTTTGCTTTAGTCCTTTCGTTTGGCCTTCTCCTCACTGCATTAAGAAGCAGAAAGGCTAGGTCTTGGCGTTATGGTACCGGTTGGCTTCGCAGCCTAATAGCTGACTATGGTGTGCCACTTATGGTGCTAGTTTGGACAGGTGTGTCCTACATACCAGCTGGAAGTGTTCCACATGGTATCCCAAGACGCCTCTTCAGCCCAAATCCATGGTCACCGGGTGCATATGAGAATTGGACTGTTATTAAGGATATGCTCAATGTTCCTGTTGTCTACATAATCGGAGCATTTATCCCAGCAACCATGATTGCAGTGCTTTATTACTTTGACCATAGTGTGGCATCCCAGCTTTCCCAGCAGAAAGAGTTCAATTTGAGAAAGCCATCTTCTTACCATTATGACTTGCTCCTTTTGGGTTTTTTGACCTTAATGTGTGGCCTTATTGGAATTCCTCCTGCAAATGGAGTCATACCACAGTCTCCAATGCACACAAAAAGTCTGGCAACTCTTAAACATCAGTTGCTTCGTAACAAACTGGTGGTAACCGCACGAAAAAGTATGGGAAAGAATGCTAGTTTAGGACAGTTATATGGCAACATGCAAGAAACCTACAATCAAATGCAGACGCCTCTTGTTTACCAGGACCCCTCTGCTCGAGCACAAGGACTAAGAGAACTTAAAGAATCAACCATTCAAGCAGCTACCAGTATGGGAAACGTGGATGCCCCAGTAGATGAGACTATATTTGATGTTGAGAAAGAAATAGACGACCTGCTTCCTGTTGAGGTAAAGGAACAGCGTCTCAGTAACTTGCTTCAATCGGTAATGGTGGGAGGATGCGTTGCGGCCATGCCTCTCCTCAAGAAGATCCCAACCTCAGTCCTTTGGGGCTACTTTGCCTTCATGGCCATTGAAAGTTTGCCAGGAAACCAGTTTTGGGAAAGGATCCTATTACTCTTCACTGCACCAAGCAGAAGATACAAGGTGCTTGAGGATTACCATGCTACTTTCGTAGAAACAGTTCCTTTCAAGACAATAGCAACATTCACCATTTTCCAAACCATTTATCTTCTTGTATGTTTTGGACTAACATGGGTTCCTATTGCCGGAGTCATGTTTCCTATGATGATCATGCTCTTAGTTCCGGTTAGACAGTACTTTCTCCCCAAGTTTTTCAAAGGGGTACACCTTCAAGACTTGGATGCAGCAGCGTATGAAGAGCAAACAGCTTTACCATTCAACCTTGCAACACACTCAGAGTTTGGAGCTGGTGCTTCTCAAGTTGGAGAAGGTGAAATCCTAGATGAAGTATTTACTAGAAGCCGTGGCGAGTTTAGGCACACTAGCAGTCCAAAGATCACAAGCTCCACCCCAACACCAAGAACTGATCCTAAAAGCCATCTAAGCCCACGTCTCTCATTTAGTTCTCGCGTGGGTGAGCTCAAAACTGAGCAGAGTCCTCGGTCTGGTGCAAGAGGTCCCCTCAGTCCTAAGGGAGGAGAAGTGAGATCATCAAATCTGGGAAGAAGTCCTCTTAATCCAGATTCAAAACAGCAGGACCACAACTAA 2172 0.4471 MEETFVPFEGIKNDLRGRLMCYKQDWLGGIRAGLRIWAPTTYIFFASAIPVISFGEQLERDTDGVLTAVQTLASTSVCGIIHSILGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRDLFLAWTGWVCVWTALLLFLLAILGACSIINRFTRIAGELFGLLIAMLFMQQAIKGLVDEFRIPGRQNPKSIEFIPSWRFANGMFALVLSFGLLLTALRSRKARSWRYGTGWLRSLIADYGVPLMVLVWTGVSYIPAGSVPHGIPRRLFSPNPWSPGAYENWTVIKDMLNVPVVYIIGAFIPATMIAVLYYFDHSVASQLSQQKEFNLRKPSSYHYDLLLLGFLTLMCGLIGIPPANGVIPQSPMHTKSLATLKHQLLRNKLVVTARKSMGKNASLGQLYGNMQETYNQMQTPLVYQDPSARAQGLRELKESTIQAATSMGNVDAPVDETIFDVEKEIDDLLPVEVKEQRLSNLLQSVMVGGCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKTIATFTIFQTIYLLVCFGLTWVPIAGVMFPMMIMLLVPVRQYFLPKFFKGVHLQDLDAAAYEEQTALPFNLATHSEFGAGASQVGEGEILDEVFTRSRGEFRHTSSPKITSSTPTPRTDPKSHLSPRLSFSSRVGELKTEQSPRSGARGPLSPKGGEVRSSNLGRSPLNPDSKQQDHN 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03494 723 MobiDBLite consensus disorder prediction 644 723 - -
Pumo5g03494 723 Pfam HCO3- transporter family 202 373 IPR011531 GO:0006820|GO:0016020
Pumo5g03494 723 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016020
Pumo5g03494 723 Pfam HCO3- transporter family 7 179 IPR011531 GO:0006820|GO:0016020
Pumo5g03494 723 PANTHER ANION EXCHANGE PROTEIN 2 610 IPR003020 GO:0005452|GO:0006820|GO:0016020
Pumo5g03494 723 MobiDBLite consensus disorder prediction 649 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03494 Pumo-Chr5 84232558 84237199 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03494 1 694 Antiporters AT3G62270 82.878 0.0 1172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03494 K24194 - gmx:100776705 1403.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03494 5 84232558 84237199 Pumo5g03494 5 84232558 84237199 ECH