Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo5g03471 | ATGTCATTTGGTATATTGAAAAAGGGTCAAGGCTTGGTGCTGAAATGGATGCTTATATTATCTTGCCTGGTATTTATGATTGAGGCTGGTGAAAATGATAAAACAATGGAGCTCCCTTCTTTATATAATTCTAGATCACCTTTGGCCTTTGTTGTTGTTCATGATCTACCTCTACCAGCAAATTTCCACGTGTCGAAGCATGTGCTTTCTCATGGTGCACCGATTGCAGCACTGTCACCAGTCAATCCTCCTTCATATGGTCCTTTCACAAGTAATGGCCACCCCCCTGCAAGTTCACATTTATCCATACCATTCAAGAAGAAGAGTGAAATGAAACCTCCAATTTCTGGCTTTGAAGATATTGCTCCTGTGCATTCTACTGCAGCTGCAGGCCCTTCCGCTTTGGTCCAGCCACCATTGTCTCCTTATGCTTCTAATTGTTGTAAACAAGACATGGTGCTGAAAAGAGGCAGTAAGGATTGCCGCTGTGCATATCCCATAAAGCTAGACCTTTTTCTTTCAAATGTCTCTCAAAATCCTAATTGGAATGATTTTCTTGATGAATTAGCTACCCAGCTTGGGTTGCGAAATACCCAGATTGAACTGATAAACTTTTATGTACTCAGCTTATCAACATTAAATATATCAATGAATATTACTCCACATAAAGGCATCAGTTTCTCTGCCAATGAAGTTTCTAAAATAAACTCTTCGCTTTCAATGCATAAGGTTCAACTAGACCCTGGATTAGTGGGTGGATACAAACTTCTCAATTTAACGTGGTTTGAACCACCTCCGCCTTCTCAAGCTCCTACTTTAGCTGCATCACCTGTGAATACACCTTTGTATCATTCACCTACTGCTACATCATCATCGAGTTCTCCGAAAAAAGGAAGGCATTCAAATTTGTTTCTTATTCTTGGAATTGCTATTGGCATAATCTTCATTGCTATCGTATCTGTACTTATATTCTGTTTATGTACGTTCCTGCCAAAAGCAAACACACCTCCTATAGAAACTGAAAAGCCAAGGACAGAGAGTGCAATTTCAACTGTGGGTTCTCTTCCCCACCCAACTAGTACACGATTTATTGCTTATGAAGAGCTTAAAGAAGCAACAAACAATTTTGAACCAGCAACCGTACTTGGAGAAGGAGGATTTGGTAGAGTTTTTAAAGGTGTCTTAAATGATGGTACTCCTGTAGCAATTAAGAGGCTTACAAGTGGAGGGCAACAGGGTGACAAAGAGTTTTTGGTCGAGGTTGAGATGCTTAGTCGGTTGCATCATCGTAACCTTGTAAAACTAGTGGGATACTTTAGTAATCATGACTCATCACAAAATTTACTTTGCTATGAGCTTGTTCCTAATGGAAGTTTGGAGGCTTGGCTTCATGGTCCCTTGGGAATCAATTGTCCTTTGGATTGGGACACCAGAATGAAGATTGCGCTTGATGCTGCAAGGGGACTTTCATACCTGCATGAAGACTCACAGCCCTGTGTAATACATAGAGACTTCAAGGCATCCAACATATTGCTTGAGAACAACTTTCATGCTAAGGTTGCAGATTTTGGTCTTGCTAAGCAAGCACCTGAAGGCAGATCTAATTATTTGTCTACTCGTGTCATGGGGACATTTGGATACGTAGCTCCTGAATATGCCATGACTGGACACCTACTTGTTAAAAGTGATGTTTATAGCTATGGTGTTGTCTTGCTGGAACTGCTTACTGGTAGGAAGCCTGTGGATATGTCACAGCCAACTGGACAAGAGAACCTTGTTACTTGGGCTAGGCCAATCCTTAGAGATAAGGACCGGTTGGAAGAGATTGCTGATCCAAGACTTGGGGGAAAGTATCCAAAGGAAGATTTTGTACGAGTTTGCACTATTGCTGCAGCCTGTGTTGCTCCGGAAGCAAACCAACGACCCACAATGGGTGAAGTGGTACAGTCACTTAAAATGGTGCAGCGCATCACAGAATACCAAGATTCTGTGTTAGCTTCAACCAATACTCGACCCAACTTGAGACAGTCCTCTAGCACTTTTGAATTTGATGGAACATCTTCAATGTTCTCATCGGGTCCTTACTCTGGTCTAAGTGCCTTTGACAATGACAACATTTCCAGGACTGTGGTTTTCTCTGAAGATCTTTGTGAAGGACGATGA | 2163 | 0.4166 | MSFGILKKGQGLVLKWMLILSCLVFMIEAGENDKTMELPSLYNSRSPLAFVVVHDLPLPANFHVSKHVLSHGAPIAALSPVNPPSYGPFTSNGHPPASSHLSIPFKKKSEMKPPISGFEDIAPVHSTAAAGPSALVQPPLSPYASNCCKQDMVLKRGSKDCRCAYPIKLDLFLSNVSQNPNWNDFLDELATQLGLRNTQIELINFYVLSLSTLNISMNITPHKGISFSANEVSKINSSLSMHKVQLDPGLVGGYKLLNLTWFEPPPPSQAPTLAASPVNTPLYHSPTATSSSSSPKKGRHSNLFLILGIAIGIIFIAIVSVLIFCLCTFLPKANTPPIETEKPRTESAISTVGSLPHPTSTRFIAYEELKEATNNFEPATVLGEGGFGRVFKGVLNDGTPVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYFSNHDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRSNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPTGQENLVTWARPILRDKDRLEEIADPRLGGKYPKEDFVRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRITEYQDSVLASTNTRPNLRQSSSTFEFDGTSSMFSSGPYSGLSAFDNDNISRTVVFSEDLCEGR | 720 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo5g03471 | 720 | Gene3D | Phosphorylase Kinase; domain 1 | 357 | 453 | - | - | |
Pumo5g03471 | 720 | FunFam | Receptor-like serine/threonine-protein kinase ALE2 | 356 | 453 | - | - | |
Pumo5g03471 | 720 | PANTHER | OS01G0750732 PROTEIN | 144 | 667 | - | - | |
Pumo5g03471 | 720 | ProSiteProfiles | Protein kinase domain profile. | 376 | 654 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo5g03471 | 720 | Gene3D | Transferase(Phosphotransferase) domain 1 | 454 | 672 | - | - | |
Pumo5g03471 | 720 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 500 | 512 | IPR008271 | GO:0004672|GO:0006468 | |
Pumo5g03471 | 720 | Pfam | Protein kinase domain | 379 | 649 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo5g03471 | 720 | ProSitePatterns | Protein kinases ATP-binding region signature. | 382 | 404 | IPR017441 | GO:0005524 | |
Pumo5g03471 | 720 | FunFam | Receptor-like serine/threonine-protein kinase ALE2 | 454 | 670 | - | - | |
Pumo5g03471 | 720 | CDD | STKc_IRAK | 382 | 652 | - | - | |
Pumo5g03471 | 720 | SUPERFAMILY | Protein kinase-like (PK-like) | 350 | 653 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo5g03471 | Pumo-Chr5 | 83944124 | 83952007 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo5g03471 | 12 | 720 | Receptor kinase-like Gene Family | AT4G02010 | 68.636 | 0.0 | 973 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_Extensin | Pumo5g03471 | Pkinase | 8.6e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo5g03471 | - | - | gmx:100775615 | 1347.8 |