Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03459 ATGGCATTACGATCGATTCAACGCTCGACAAGTTCTGGATCTGAAGGAGGAGATCCGCAAATCGACGAGAGGAAGCGGAAGAGGATGCTGTCGAACCGCGAGTCCGCGAGGCGATCGCGGATGAAGAAGCAGAAACAGCTGGAAGATTTGACCGATGAAGTTAGCAGATTGCAAGGCGCGAACAAGAAGCTCGTGGAGAACATAAAGGCCAAGGAAGAAGCATGCGTTGAAACCGAAGCCGTGAACAGCATTCTGAGAGCACAGACCATGGAACTGGCCGATCGATTGCGCTTCTTGAATTCCATCCTTGAGATCGCTGAAGAGGTCGGAGGATTATCCGTTGAGATTCCCGAGATTCCAGATCCTCTCCTCAAGCCGTGGCAGATTCCTCACCCGATACAACCGATTATGGCCACCGCAAACATGTTTCTGCGCTGA 438 0.5183 MALRSIQRSTSSGSEGGDPQIDERKRKRMLSNRESARRSRMKKQKQLEDLTDEVSRLQGANKKLVENIKAKEEACVETEAVNSILRAQTMELADRLRFLNSILEIAEEVGGLSVEIPEIPDPLLKPWQIPHPIQPIMATANMFLR 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03459 145 MobiDBLite consensus disorder prediction 1 52 - -
Pumo5g03459 145 MobiDBLite consensus disorder prediction 1 17 - -
Pumo5g03459 145 MobiDBLite consensus disorder prediction 18 52 - -
Pumo5g03459 145 CDD bZIP_plant_GBF1 25 75 IPR045314 GO:0003700|GO:0006355
Pumo5g03459 145 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 27 42 IPR004827 GO:0003700|GO:0006355
Pumo5g03459 145 Gene3D - 22 79 - -
Pumo5g03459 145 Coils Coil 33 74 - -
Pumo5g03459 145 Pfam bZIP transcription factor 24 75 IPR004827 GO:0003700|GO:0006355
Pumo5g03459 145 SMART brlzneu 20 84 IPR004827 GO:0003700|GO:0006355
Pumo5g03459 145 SUPERFAMILY Leucine zipper domain 24 72 IPR046347 GO:0003700|GO:0006355
Pumo5g03459 145 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 22 69 IPR004827 GO:0003700|GO:0006355
Pumo5g03459 145 FunFam BZIP transcription factor 22 73 - -
Pumo5g03459 145 PANTHER BZIP TRANSCRIPTION FACTOR 44 9 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03459 Pumo-Chr5 83849585 83850779 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03459 5 143 bZIP Transcription Factor Family AT3G62420 53.846 4.25e-48 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo5g03459 bZIP_1 5e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03459 K25786 - gmx:778144 249.98