Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03458 ATGGAGGAGAAGAAGAAGAAGATGAAGATAATGCTGTCAAAACGTGAATCAGCGAGGAGGTCGCAGATGAGGAAGCATAAGCAATTGGAGAATTTGACTAATGAAGTCAACAGATTGGAAGGTGCAAACAAGAATCTAGCAGAGTGCATAAAAGCAAGGGAGGAAGCATACGTTGAGTCTGAAGCTGCTAACAACATCCTGAGGACTCAGACTGTGGAATTGGCCCATCGATTGTGCTTTTTGAACTCTATCATTGAGGGTGCTAAAGACGTCAACAAGTTATCTGTTGAAATTCCAGATATTAAGCCCTTGTAG 315 0.4222 MEEKKKKMKIMLSKRESARRSQMRKHKQLENLTNEVNRLEGANKNLAECIKAREEAYVESEAANNILRTQTVELAHRLCFLNSIIEGAKDVNKLSVEIPDIKPL 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03458 104 MobiDBLite consensus disorder prediction 1 26 - -
Pumo5g03458 104 Coils Coil 22 49 - -
Pumo5g03458 104 CDD bZIP_plant_GBF1 11 57 IPR045314 GO:0003700|GO:0006355
Pumo5g03458 104 SUPERFAMILY Leucine zipper domain 6 54 IPR046347 GO:0003700|GO:0006355
Pumo5g03458 104 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 88 - -
Pumo5g03458 104 Gene3D - 4 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03458 Pumo-Chr5 83847529 83847843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03458 6 101 bZIP Transcription Factor Family AT3G62420 44.792 1.18e-21 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03458 K25786 - gmx:778144 127.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03458 5 83847529 83847843 Pumo5g03458 5 83847529 83847843 ECH
Pumo5g03458 5 83847529 83847843 Pumo3g02177 3 33512377 33513756 PCT