Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03457 ATGGCTTCAATTCAACGTTCGGTGAAATCTGAAAATGAAGGAGGAGATCCACAAATTTTGGTGAAATGTGAATATGAAGGAGGAGATCCACAACCACCACAAATGGAGGAGATGGAGATGGAGATGAAGATGAAGAGGAGGGCATTGAACCGTGAATATGCAAGGCAATCGCGGATGAGGAAGCAGAAGAGGCTGGAGGATTTGACCAATGAAGTCAACATGTTGCAAAGTGCAAACAAGAAGCTGGTAGAGAGAATCAAGGCTAAGGAGGAAGCCTATGCTGAGACCCAAGTTCATAACAACATCTTGAGAACTCAAACTCTGGAATTGGCCGATCGATTGCGCTTTTTGAACTCTATCATTCAGCTTGCTGAAAAGGCCACAAAGGGTTATCTTAAGCCATAG 405 0.4395 MASIQRSVKSENEGGDPQILVKCEYEGGDPQPPQMEEMEMEMKMKRRALNREYARQSRMRKQKRLEDLTNEVNMLQSANKKLVERIKAKEEAYAETQVHNNILRTQTLELADRLRFLNSIIQLAEKATKGYLKP 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03457 134 Pfam bZIP transcription factor 43 95 IPR004827 GO:0003700|GO:0006355
Pumo5g03457 134 Coils Coil 35 92 - -
Pumo5g03457 134 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 40 87 IPR004827 GO:0003700|GO:0006355
Pumo5g03457 134 MobiDBLite consensus disorder prediction 1 33 - -
Pumo5g03457 134 SUPERFAMILY Leucine zipper domain 43 91 IPR046347 GO:0003700|GO:0006355
Pumo5g03457 134 SMART brlzneu 39 102 IPR004827 GO:0003700|GO:0006355
Pumo5g03457 134 CDD bZIP_plant_GBF1 46 94 IPR045314 GO:0003700|GO:0006355
Pumo5g03457 134 Gene3D - 41 98 - -
Pumo5g03457 134 PANTHER BZIP TRANSCRIPTION FACTOR 44 11 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03457 Pumo-Chr5 83845328 83845732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03457 41 132 bZIP Transcription Factor Family AT3G62420 47.826 1.09e-21 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo5g03457 bZIP_1 2e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03457 K25786 - gmx:100813053 145.206