Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03428 ATGGCGGCAGAGGCGGCGTTGTTCTTTTCTGTGGCATCAGTGGTGGAGGACGTGCTTCAGCAGCACGGTTCTCGCCTCAAAGATCTTGATTTGGAATCTAGGAAAGCTGAAGAAGCTGCATCAAGAAGATATGAAGCAGCGGGGTGGTTGAGAAAAATGGTTGGAGTTGTTGCAGCCAAAGATTTACCAGCAGAGCCCTCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATTATTCTCTGTAATGTTATTAATAAAGTTCAATCCGGAGCTGTACCTAAGGTTGTGGAGAGTCCTGTTGATTCTGCATTGATCCCTGATGGGGCACCATTAACGGCATATCAGTATTTTGAAAACGTGAGGAATTTCCTGGTGGCTGTCCAAGAAATTGGACTTCCTACCTTCGAAGCATCTGATCTGGAACAAGGAGGAAAATCATCTAGGATTGTCAATTGCGTGTTGGCCCTGAAATCCTACAGTCAATGGAAAATGAGCGGGTCAAATGGTGTGTGGAAATTTGGTGGAAATCTCAAACCCACTGTGTCTGCAAAATCTTTTGTGAGAAAAAACTCGGACCCATTTACTAATTCCTTGTCAAGGACTTCATCGATAAATGATAAATCTCTCAATGCTCTTACTTCTGACGTTGAGATTCTTGAGAATAATAAAATGTCTGGTTCCCATTCTTTGAGTATGCTTGTTCGGGCAATTTTATCGGATAAGAAGCCAGAAGAAGTTCCAACGTTGGTTGAATCTGTTTTGAACAAGGTTGTGGAGGAGTTTGAGCAACGAATTGCAAGCCAAGGTGAACAGCAGAAGATTCATATGGTAACAAAAAAAGAGGATTGCATTCATAAAAATCAAGTTAATGCTATGGTAACAAAAAAAGAGGATCGCATTCATAAAAATCAAGTTGCTGATGAGGAATCACAAAGGCAACTTCTGAAGCAGCAAATGCTCTTTGACCAGCAGCAAAGAGAGATTCAAGAGCTAAGGCATACTCTTCACTCCACAAAAGCTGGTATGCAGTTCATGCAAATGAAATTTCATGAGGAGTTCTCCAATCTTGGCATGCACATTCATGGCTTAGCTAATGCTGCTTCTGGATATCATAGAGTTTTTGAAGAAAATCGCAAACTATACAATCAAGTCCAGGATCTTAAGGGAAGTATTAGGGTGTACTGTCGAGTAAGACCCTTCTTTCCTGGACAATCAAACCATTTGAGCGCAGTGGAAAATATAGAAGAAGGAACTATCATAGTTAATATTCCTTCAAAGAATGGGAAAGGACGCAGGTCCTTCAACTTTAACAAAGTCTTTGGACCATCTGCAACACAAGCCGAGGTCTTCTTAGATATGCAGCCACTCGTTAGATCTGTTCTTGATGGTTATAATGTTTGCATATTTGCATACGGCCAAACAGGATCAGGAAAAACTTACACTATGACTGGACCAAAAGAGATCACAGAGAAAAGCCAAGGTGTAAATTACAGGGCTCTAAGTGATTTGTTTCTTATAGCGGATCAAAGAAGGGACACTTTCCACTATGACGTTTCTGTTCAAATGATTGAGATTTATAATGAGCAAGTCAGGGATCTGCTGGTCACTGATGGAACAAACAAAAGATATCCTTTTACCAAAATACGAAGTAGTTCTCAAAAAGGACTCAGTGTGCCAGATGCAAGCCTTGTCTCTGTATCATCAACTATTGATGTCATTGAACTAATGAACCTCGGGCATAGGAACCGTGCAGTTGGAGCAACAGCCCTTAATGACCGAAGTAGCCGATCTCATAGGTATGATATATCCTATTCACCTTTTGTGATGGTATTTGTTGGACACAATTAA 1851 0.4106 MAAEAALFFSVASVVEDVLQQHGSRLKDLDLESRKAEEAASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVINKVQSGAVPKVVESPVDSALIPDGAPLTAYQYFENVRNFLVAVQEIGLPTFEASDLEQGGKSSRIVNCVLALKSYSQWKMSGSNGVWKFGGNLKPTVSAKSFVRKNSDPFTNSLSRTSSINDKSLNALTSDVEILENNKMSGSHSLSMLVRAILSDKKPEEVPTLVESVLNKVVEEFEQRIASQGEQQKIHMVTKKEDCIHKNQVNAMVTKKEDRIHKNQVADEESQRQLLKQQMLFDQQQREIQELRHTLHSTKAGMQFMQMKFHEEFSNLGMHIHGLANAASGYHRVFEENRKLYNQVQDLKGSIRVYCRVRPFFPGQSNHLSAVENIEEGTIIVNIPSKNGKGRRSFNFNKVFGPSATQAEVFLDMQPLVRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFLIADQRRDTFHYDVSVQMIEIYNEQVRDLLVTDGTNKRYPFTKIRSSSQKGLSVPDASLVSVSSTIDVIELMNLGHRNRAVGATALNDRSSRSHRYDISYSPFVMVFVGHN 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03428 616 SUPERFAMILY Calponin-homology domain, CH-domain 38 172 IPR036872 -
Pumo5g03428 616 Pfam Kinesin motor domain 397 599 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g03428 616 Gene3D Kinesin motor domain 336 601 IPR036961 -
Pumo5g03428 616 SMART kinesin_4 389 615 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g03428 616 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Pumo5g03428 616 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 333 544 - -
Pumo5g03428 616 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Pumo5g03428 616 CDD CH_AtKIN14-like 42 159 - -
Pumo5g03428 616 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 599 IPR027640 GO:0003777|GO:0007018
Pumo5g03428 616 Gene3D - 32 163 IPR036872 -
Pumo5g03428 616 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 351 600 IPR027417 -
Pumo5g03428 616 PRINTS Kinesin heavy chain signature 589 606 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g03428 616 PRINTS Kinesin heavy chain signature 464 485 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g03428 616 SMART ch_5 42 160 IPR001715 GO:0005515
Pumo5g03428 616 FunFam Kinesin-like protein KIN-14I isoform A 27 179 - -
Pumo5g03428 616 Coils Coil 19 39 - -
Pumo5g03428 616 ProSiteProfiles Kinesin motor domain profile. 391 616 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03428 Pumo-Chr5 83461076 83465203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03428 379 599 Calmodulin-binding Proteins AT5G65930 35.426 1.74e-34 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03428 K10406 - gmx:100795476 1056.2