Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03427 ATGCATTTGGTTGACTTGGCAGGAAGTGAGAGGGTGGATAAATCTGAGGCCACAGGAGATAGACTAAAAGAGGCACAGCATATTAACAAATCTCTTTCAGCTTTGGGAGATGTCATTGCTTCCCTTGCTCAGAAAAACTCACACGTTCCTTATAGAAACAGTAAACTCACACAATTACTCCAAGATTCACTTGGAGGACAGGCTAAGACACTGATGTTTGTTCACATAAGTCCAGAAAGTGATGCTATTGGAGAAACAATTAGTACCTTAAAATTTGCTGAAAGAGTTGCCACAGTTGAACTTGGTGCTGCTCGAGTAAACAAAGATAGTGCAGATGTTAAAGAGCTCAAAGAACAGATTGCCAGCCTCAAGGCAGCACTGGCAAGAAAGGAAGGAGAATCAGAACATTCTTTTTCCAGCAGCTCTGAAAAATACAGAACAAAGGCTAGTGAGCTATCACCTTATCATGTAAACCAGCGAGATCCTGACACTGTGGATCAGCTTGGATGCCCGCGACCAATGGTTGAGGTTGGCAACATAGAACTTCAGAGTAATACCACAGTGAGGCACAAAACTCAGAGCTTTGATTTTGATGAGATATCAGCAAATTCACCTCCATGGCCCCCAGTGAACAATAGTCTTGGACAAAACTATGGGGAGGATGACAAAGAAACTGGTTCTGGAGAATGGGTTGACAAGGTCATGGTAAACAAGCAAGATGTAAGCAAAACTGAGAACCTCTTGGGGTGTTGGCAAGCAAGCAATGGGAACTTATCCGAGGCCTTTTATCAGAAATATCTCAAAGATTCTCCCAAAATGTACTCAGAACAATCCTATAATATGTTCATGGGAGCCAACCAGTTTAACATTGCGGGTTCAGATGACATGGATGAGCTTGATGCTGCAACCAGTGATTCCTCAGAACCTGACTTACTTTGGCAATTTAATCATTCCAAACTTAGCAGTGTGACCAATGGAATTGGATCAAAGACTATGAGATCTATCTCAAAGGCAGCAAAAAACAGCCCCGAGTTGAGCAAGAATGCTGTTCATTCTTCTCCTCTAGGTCCTTCACCTTCATTGAAACAATCAAATGGTGTTTCACATCGAACAGGGAGGCATCCAGCTCCAGTTGACGTGAAACGTAGAACTGGGAGTAGAAAATAA 1167 0.4259 MHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPESDAIGETISTLKFAERVATVELGAARVNKDSADVKELKEQIASLKAALARKEGESEHSFSSSSEKYRTKASELSPYHVNQRDPDTVDQLGCPRPMVEVGNIELQSNTTVRHKTQSFDFDEISANSPPWPPVNNSLGQNYGEDDKETGSGEWVDKVMVNKQDVSKTENLLGCWQASNGNLSEAFYQKYLKDSPKMYSEQSYNMFMGANQFNIAGSDDMDELDAATSDSSEPDLLWQFNHSKLSSVTNGIGSKTMRSISKAAKNSPELSKNAVHSSPLGPSPSLKQSNGVSHRTGRHPAPVDVKRRTGSRK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03427 388 MobiDBLite consensus disorder prediction 335 370 - -
Pumo5g03427 388 Pfam Kinesin motor domain 1 98 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g03427 388 Coils Coil 106 133 - -
Pumo5g03427 388 Gene3D Kinesin motor domain 1 141 IPR036961 -
Pumo5g03427 388 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 300 IPR027640 GO:0003777|GO:0007018
Pumo5g03427 388 MobiDBLite consensus disorder prediction 335 388 - -
Pumo5g03427 388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 132 IPR027417 -
Pumo5g03427 388 MobiDBLite consensus disorder prediction 374 388 - -
Pumo5g03427 388 ProSiteProfiles Kinesin motor domain profile. 1 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g03427 388 SMART kinesin_4 1 107 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g03427 388 MobiDBLite consensus disorder prediction 131 162 - -
Pumo5g03427 388 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 37 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03427 Pumo-Chr5 83458597 83460981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03427 1 135 Calmodulin-binding Proteins AT5G65930 52.593 2.85e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03427 K10406 - gmx:100795476 722.62