Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03398 ATGAGGAGAATGGTGGCAAGCACCTCAGTGAAAACTAAAGAAAACAGGAAAAGAGGAATGATTCTTCCATTTGAACCACATTCCATCACCTTTGATGAAGTAACATATTCTGTTGACATGCCCCAGGAAATGAGGGAGCAGGGTGTTGTTGAGGATAAGTTGGTTCTTTTGAAGGGTGTCAGTGGAGCTTTCAGGCCAGGCGTTCTCACTGCACTAATGGGCGTCACTGGTGCCGGCAAAACAACTTTGTTAGATGTACTTGCTGGTAGAAAAACCGGGGGATATATTGGTGGCAACATTACAATTTCCGGCTACCCTAAGAAGCAAGAAACATTTGCAAGAATTTCTGGATATTGTGAACAAAATGACATTCACTCTCCTTATGTCACCGTATATGAATCTGTGCTCTATTCAGCATGGCTCCGATTGTCTGTGGAAATCGGTGCTGAAACCATGAAGATTTTTGTTGAGGAAGTGATGGAACTTGTGGAGCTGAACTCAATAAGGAATGCAATTGTTGGATTGCCTGGCATTAACTGTCTATCCACCGAGCAGCGCAAAAGGTTGACTATTGCTGTGGAGCTAGTGGCCAATCCTTCTATCATATTCATGGATGAGCCAACTTCAGGGCTAGATGCCAGAGCTGCTGCTATTGTTATGAGAGCTGTTAGGAACATAGTGGACACTGGAAGAACAATTGTCTGTACCATTCATCAGCCCAGCATTGATATATTTGAATCTTTTGACGAGCTTTTCCTAATGAAGAGAGGAGGGCAAGAGATATACGTGGGACCCCTTAGACCTCAATCTTCACATTTAATCAGATACTTTGAGGAAATTCAAGGTGTCAAAAAGATTGACGATGGCTATAACCCAGCAACGTGGATGTTGGAAATCACGACTACAGGGAAAGAAATGGAGTTGGGGATTGATTATGCCGATGTGTACAAATATTCAGAGTTATACAGGAGAAACGTGGTTCTTATTAAAGAATTAAGCACTCCAGCCCCTGGTTCGAAGGACCTTTGTTTTCCTACAAAGTACTCAAGGTCCTTTATTACCCAATGCATGGCTTGCTTATGGAAACAACATTGGTCTTATTGGCGCAATCCGCTATACAATGCCATAAGGTTTCTCTTCACTACTGTTGTCGCTGTGTTGCTTGGGAGCATGTTTTGGAAACTTGGCACCAAAATTGATAGGGAACAAGACCTCTTTAACGCTATGGGATTTATGTATAATGCTTGTCTGCTTATTGGCATTAAAAATTGTAACTCAGTGCAACCTGTGGTGAGTGTAGAGCGAACAGTCTTTTATAGGGAAAAGGCTGCTGGAATGTATTCATCTTTGGCATATGCTGCTCTTATTGAAATCCCTTATGTTGTGGTACAAACTGTGGAATACTCCGTTATAGTTTACTCTATGGTAGGTTATGAGTGGAGTGTCACTAAATTTTTTTGGTACCTATTCTTCATGTTCTTCACCCTCCTGTACTTTACCTATTATGGCCTAATGTTGACAGCCATGACCCCAACCCTATCCATTTCCGCGTTATTCAGCAGTGCATCCACTTCATTATGGAATCTCTTTTCTGGATTCATAGTTCCACGACCAAGGATCCCAATATGGTGGAGATGGTACTCTTGGACAAATCCAGTATCTTGGACTCTGTATGGGTTGTTGGTTTCCCAGTTCGGAGATACAACAGACAATATTGACTTTAATGGAAGAAGTATTTCAGTAGAAGACTTTTTGAGAGATTATTTTGGTTTCAAGCATGATTTTTTGGGAGTGGTTGCTGCTATGGTTGTTGGATTCACAGTTCCTTTTGTATTAGTTTTTGCCTTCTCTATCAAGATGTTTAATTTCCAACGATGCTAA 1881 0.4141 MRRMVASTSVKTKENRKRGMILPFEPHSITFDEVTYSVDMPQEMREQGVVEDKLVLLKGVSGAFRPGVLTALMGVTGAGKTTLLDVLAGRKTGGYIGGNITISGYPKKQETFARISGYCEQNDIHSPYVTVYESVLYSAWLRLSVEIGAETMKIFVEEVMELVELNSIRNAIVGLPGINCLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNIVDTGRTIVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLRPQSSHLIRYFEEIQGVKKIDDGYNPATWMLEITTTGKEMELGIDYADVYKYSELYRRNVVLIKELSTPAPGSKDLCFPTKYSRSFITQCMACLWKQHWSYWRNPLYNAIRFLFTTVVAVLLGSMFWKLGTKIDREQDLFNAMGFMYNACLLIGIKNCNSVQPVVSVERTVFYREKAAGMYSSLAYAALIEIPYVVVQTVEYSVIVYSMVGYEWSVTKFFWYLFFMFFTLLYFTYYGLMLTAMTPTLSISALFSSASTSLWNLFSGFIVPRPRIPIWWRWYSWTNPVSWTLYGLLVSQFGDTTDNIDFNGRSISVEDFLRDYFGFKHDFLGVVAAMVVGFTVPFVLVFAFSIKMFNFQRC 626
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03398 626 Gene3D - 28 272 IPR027417 -
Pumo5g03398 626 Pfam ABC transporter 57 209 IPR003439 GO:0005524
Pumo5g03398 626 SMART AAA_5 66 258 IPR003593 GO:0016887
Pumo5g03398 626 FunFam ABC transporter G family member 40 43 273 - -
Pumo5g03398 626 Pfam ABC-2 type transporter 354 565 IPR013525 GO:0016020|GO:0140359
Pumo5g03398 626 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 29 281 IPR003439 GO:0005524
Pumo5g03398 626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 265 IPR027417 -
Pumo5g03398 626 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 8 625 - -
Pumo5g03398 626 CDD ABCG_PDR_domain2 26 264 IPR034003 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pumo5g03398 Pumo-Chr5 83068903 83072321 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03398 173 271 Calmodulin-binding Proteins AT2G36910 28.947 6.54e-06 47.8