Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03397 ATGATTATTATAGCACGCCTTATGTTTCTGCTTGCACTATTTCTTTCACTCCTAACAAACACTGGCCAAATGGTATATGCAAAAGGGAAGAACAATGTTAGAGAGGCTTGCAGTGTGACAAGGTTCCAAGGCCTTTGTGTTCAGACGCTGGCACATTTCTCCAACACTGCAGGAAGAAGCCCCAGCAAGTGGGCACGTGCGGGAGTGTCCGTGTCAATAGGCGAGGTCAAGAATGTTGAAGCATATCTTGCACAATTGAAGAGGCAAGGACACATGAAAGGAAGAAACAGAGTTGCCCTTTCAGACTGTGTTGAAACTTTTGCCTATGCCCTTGACGAGCTTCACAAATCACTTGGTGTGCTTAGGAACCTGAGCAAAAGCACGTTTAGCACCCAAATGGGGGACCTCAACACATGGATTAGTGCAGCACTCACTGATGAAGAGACTTGCCTCGACGGGTTTGAAAGCAACAACAATGAAAAGCAAGTTAAATTGTTACGAAACCGGGTTCAGAATGTGTCTTACATCACCAGTAACGCACTTGCTCTTGCCAACAAACTCGCCACTACAGGTCTGGGAAGCATCAATGATCCATAG 597 0.459 MIIIARLMFLLALFLSLLTNTGQMVYAKGKNNVREACSVTRFQGLCVQTLAHFSNTAGRSPSKWARAGVSVSIGEVKNVEAYLAQLKRQGHMKGRNRVALSDCVETFAYALDELHKSLGVLRNLSKSTFSTQMGDLNTWISAALTDEETCLDGFESNNNEKQVKLLRNRVQNVSYITSNALALANKLATTGLGSINDP 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03397 198 CDD PMEI-like_3 36 189 - -
Pumo5g03397 198 Pfam Plant invertase/pectin methylesterase inhibitor 32 183 IPR006501 GO:0004857
Pumo5g03397 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 184 - -
Pumo5g03397 198 FunFam Pectinesterase inhibitor 3 28 188 - -
Pumo5g03397 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 189 IPR035513 -
Pumo5g03397 198 SMART PMEI_2 28 183 IPR006501 GO:0004857
Pumo5g03397 198 NCBIfam pectinesterase inhibitor domain 8 187 IPR006501 GO:0004857
Pumo5g03397 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 187 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03397 Pumo-Chr5 83067142 83068029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03397 33 192 Carbohydrate Esterase AT3G14310 35.152 6.08e-22 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03397 - - gmx:100791264 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03397 5 83067142 83068029 Pumo5g03397 5 83067142 83068029 ECH