Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03330 ATGAAGATGAGATTTTTCCTTGTAGCTTGTCTGGCAGTGTTCTGTATCTTAGGGGTTTGTCAAGGAGGCAACCTCAGAAAGAAATTCTACAGGAAAACCTGTCCTCAAGCCGAGCAGATTGTTAGGACCAAAATCCAGGAACATGTCTCTGCAAGGCCCGATTTGCCTGCCAAGTTGATCAGAATGCATTTTCACGACTGTTTTGTCAGGGGTTGTGATGGTTCGGTTTTGCTGGACTCCACTGCCACCAACACTGCAGAGAAGGATTCCATTCCCAATTTATCTTTGGCTGGCTTTGATGTCATAGATGACATTAAAGAAGCATTGGAGGCTAAATGTCCCGGAACTGTATCTTGTGCTGATATATTAGCATTGGCAGCTAGGGACGCTGTTTCTGTCAAATTTAATAAGCCTACATGGGAAGTACTTACTGGTAGAAGAGATGGGACAGTATCCATAAGTGGTGAAGCCTTAGCCAATCTGCCAGCACCTTTCTTCAACTTCACCCAGCTCAAACAAAGCTTTGCTAGTAAAAAGCTTACTGTGCACGACCTGGTTGTATTATCAGGTGCACACACAATTGGGATAGGTCACTGCAACTTATTCAGTAACAGGCTTTTCAACTTCACTGGAAAAGGTGATCAAGATCCTTCTTTGGATCCTACATATGCAAACTTTTTGAAGACAAAATGCCAAGGTCTCAGTGACACCACCACAACAGTGGAGATGGATCCTAACAGCTCAAACAGCTTTGACAGTGACTATTATTCTATCCTTCGCCAGAACAAGGGTCTGTTCCAATCAGATGCTGCCCTTTTAACAACTAAGATTTCAAGAAACATTGTCAACGAATTGGTTAAACAAAACAAGTTCTTCACAGAGTTCGGGCAGTCAATGAAGAGAATGGGAGCCATTGAGGTCCTCACAGGCTCGGCTGGGGAAATTAGGAGGAAAATGCATTTTCATGACTGTTTTGTCAGGGGTTGTGATGGTTCGGTTTTGCTGGACTCCACTGCCACCAACACTGCGGAGAAAGATGCCATTCCCAATTTATCTTTGGCTGGCTTTGATGTCATAGATGACATAAAAGATGAATTGGAGGCAAAATGTCCCGGAATTGTATCTTGTGCTGACATACTAGCATTGGCAGCTAGGGACTCTGTTTCTGCCAAATTTAATAAGCCTACGTGGGAAGTACTTACCGGTAGAAGAGATGGCACAGTATCCATAAGTGGTGAAGCCTTAGCCAATCTGCCAGCACCATTTTTCAATTTCACCCAGCTCAAACAAAGCTTTGCTAGTAAACAGCTTACCGTGCACGATCTGGTTGTATTATCAGGAGCTCACACAATTGGGATAGGTCACTGCAACTTATTCAGTAACAGGCTTTTCAACTTCACCGGAAAAGGTGATCAAGATCCTTCTTTGAATCCTACTTATGCCGATTTTTTGAAGACAAAATGCCAAGGTCTCAGTGACACCACCACAACAGTAGAGATGGATCCTAACAGCTCAGACAGCTTTGACAGTAACTATTATTCTATCCTTGTCCAAAACAAAGGTCTGTTCCAATCAGATGCTGCCCTTTTAACAACTAAGATTTCAAGAAACATTGTCAACGAATTGATCAAACAAGACAAGTTCTTCACAGAGTTTGGGCAATCAATGAAGAGAATGGGAGCCATTGAGGTCCTAACAGGCTCGGCTGGGGAAATTAGGAGGAAGTGCTCTGTTGCCAACTCTTAA 1746 0.4324 MKMRFFLVACLAVFCILGVCQGGNLRKKFYRKTCPQAEQIVRTKIQEHVSARPDLPAKLIRMHFHDCFVRGCDGSVLLDSTATNTAEKDSIPNLSLAGFDVIDDIKEALEAKCPGTVSCADILALAARDAVSVKFNKPTWEVLTGRRDGTVSISGEALANLPAPFFNFTQLKQSFASKKLTVHDLVVLSGAHTIGIGHCNLFSNRLFNFTGKGDQDPSLDPTYANFLKTKCQGLSDTTTTVEMDPNSSNSFDSDYYSILRQNKGLFQSDAALLTTKISRNIVNELVKQNKFFTEFGQSMKRMGAIEVLTGSAGEIRRKMHFHDCFVRGCDGSVLLDSTATNTAEKDAIPNLSLAGFDVIDDIKDELEAKCPGIVSCADILALAARDSVSAKFNKPTWEVLTGRRDGTVSISGEALANLPAPFFNFTQLKQSFASKQLTVHDLVVLSGAHTIGIGHCNLFSNRLFNFTGKGDQDPSLNPTYADFLKTKCQGLSDTTTTVEMDPNSSDSFDSNYYSILVQNKGLFQSDAALLTTKISRNIVNELIKQDKFFTEFGQSMKRMGAIEVLTGSAGEIRRKCSVANS 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03330 581 FunFam Peroxidase 327 430 - -
Pumo5g03330 581 CDD secretory_peroxidase 24 318 IPR033905 GO:0004601|GO:0042744
Pumo5g03330 581 Gene3D - 319 580 - -
Pumo5g03330 581 ProSiteProfiles Plant heme peroxidase family profile. 24 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g03330 581 ProSiteProfiles Plant heme peroxidase family profile. 319 580 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g03330 581 SUPERFAMILY Heme-dependent peroxidases 25 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo5g03330 581 SUPERFAMILY Heme-dependent peroxidases 318 580 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo5g03330 581 Gene3D - 28 318 - -
Pumo5g03330 581 FunFam Peroxidase 419 559 - -
Pumo5g03330 581 ProSitePatterns Peroxidases proximal heme-ligand signature. 441 451 IPR019793 -
Pumo5g03330 581 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Pumo5g03330 581 Gene3D Peroxidase, domain 2 419 559 - -
Pumo5g03330 581 Gene3D Peroxidase, domain 2 162 302 - -
Pumo5g03330 581 FunFam Peroxidase 162 302 - -
Pumo5g03330 581 Pfam Peroxidase 313 542 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g03330 581 Pfam Peroxidase 41 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g03330 581 FunFam Peroxidase 28 166 - -
Pumo5g03330 581 PANTHER PEROXIDASE 25-RELATED 12 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g03330 581 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g03330 581 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g03330 581 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g03330 581 PRINTS Haem peroxidase superfamily signature 501 516 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g03330 581 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g03330 581 CDD secretory_peroxidase 276 578 IPR033905 GO:0004601|GO:0042744
Pumo5g03330 581 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g03330 581 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g03330 581 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g03330 581 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g03330 581 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g03330 581 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g03330 581 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g03330 581 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g03330 581 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03330 Pumo-Chr5 82435903 82443071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03330 318 581 Peroxidase AT1G05260 56.929 9.69e-102 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03330 K00430 - spen:107031818 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03330 5 82435903 82443071 Pumo3g02288 3 34980889 34982543 PCT
Pumo3g02859 3 49727540 49732987 Pumo5g03330 5 82435903 82443071 PCT