Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03301 ATGGGTTCTCTCCCCCACGTAGTAGAGGATTGCATGGGCTTCCTCCAACTCTATAGCGACGGTTCCATTTTCCGTTCCAATGACATAGAGTTCAAAGTGTCACCCATTGAAGACAATTCCATAAGCTTCAAGGATTATCTCTTTGACAAGAGATTCAACCTTTCTCTTCGCTTCTACAAGCCCCGACACGTGGCACCCAAAGGCAACAATAAGAAGCTTCCTATTGTGATGTTCCTTCACGGTGGAGGCTTCTGCTTCGGTTCGCGCACGTGGCCCCATATTCACAACTGTTGCATGCGCCTCGCGTCGGGGCTCCAGGCGGTGGTGGTTTCGCCGGACTACCGTCTGGCCCCGGAGCACCGGCTGCCGGCGGCGGTGGACGACGCCGTGGAGGCGGTGAGGTGGCTCCAGAGGCAGGGGCTGAGCTTGAGGGAGGATCAAAATGGTGGGGACACGTGGTTGGGTGAGGGCGTTGACTTTGACCGCGTGTTCGTCGTGGGTGACTCTTCTGGCGGGAACATTGCGCACCACCTCGCGGTTCGGTTGGGGTCCGGTTCGAGAGAGATGGACCCGGTTCGGGTACGAGGTTACCTGCTGTTTGCGCCGTTTTTTGGCGGGGAGGTTCGGACCGAGTCCGAGGAAGGTCCACCTGAGCACATGTTGAACCTCGACTTATTAGACAGATTTTGGAGGCTGTCGATGCCTGTTGGAGAGACCAGAGACCACCCATTGGCGAATCCGTTCGGACCTGGCAGCCCAAATCTTGAACAAGTGAAGCTTGATCCTATTTTGGTGATAGTAGGTGGCAATGAATTGCTCAAGGATAGAGCAGAAAACTATGCTACAAGGTTAAAAGAATTAGACAAGGACATTAAATACGTTGAGTTTGAGGGGTGCGAGCATGGGTTTTTCACGCATGATTCATACTCATCAGAAGTTGCAGAAGAGGTCATCCAAATCCTTAAACGATTCATGCTTGAAACTTCTAGTTAG 993 0.5277 MGSLPHVVEDCMGFLQLYSDGSIFRSNDIEFKVSPIEDNSISFKDYLFDKRFNLSLRFYKPRHVAPKGNNKKLPIVMFLHGGGFCFGSRTWPHIHNCCMRLASGLQAVVVSPDYRLAPEHRLPAAVDDAVEAVRWLQRQGLSLREDQNGGDTWLGEGVDFDRVFVVGDSSGGNIAHHLAVRLGSGSREMDPVRVRGYLLFAPFFGGEVRTESEEGPPEHMLNLDLLDRFWRLSMPVGETRDHPLANPFGPGSPNLEQVKLDPILVIVGGNELLKDRAENYATRLKELDKDIKYVEFEGCEHGFFTHDSYSSEVAEEVIQILKRFMLETSS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03301 330 Coils Coil 270 290 - -
Pumo5g03301 330 Gene3D alpha/beta hydrolase 15 329 IPR029058 -
Pumo5g03301 330 PANTHER ARYLACETAMIDE DEACETYLASE 12 304 - -
Pumo5g03301 330 Pfam alpha/beta hydrolase fold 76 304 IPR013094 GO:0016787
Pumo5g03301 330 SUPERFAMILY alpha/beta-Hydrolases 4 323 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03301 Pumo-Chr5 82200030 82203823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03301 7 310 Carbohydrate Esterase AT5G16080 34.727 1.93e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03301 - - gmx:100803077 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03301 5 82200030 82203823 Pumo5g03301 5 82200030 82203823 ECH
Pumo5g03301 5 82200030 82203823 Pumo3g02951 3 52711695 52717741 PCT