Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03294 ATGGAAAATGCAAGTACATCTAGCTTAGCGAGAACGAAATCGGATCAGCTAGCGGAGACGGTGGCAACAACAGCTGTGAAGTCATCGCCACCTTCGGCGGAGGGCGGCGGAACCCTGTCGAGGAAATCGAGCCGGAGGATGACGACGGCGTCACCGGGTGGGAAAAACACACACATAAGGAAGGCTAGGAGCGCTCAGTTGAAGGTAGACGTGGACGAGGTTAGCAGCGGCGTGGCTCTTAGCCGAGCCTCCAGCGCCAGCTTGGGCCTCTCATTCTCCTTCACCGGCTTCACTCTCCCTCCTGATGAAATCGCCGACTCCAAACCATTCAGCGACGATGATATCCCGGAGGATGTTGAAGCCAGAACTCAAAAGCCAAAGTTTCAGACGGAACCTACTCTGCCAATATATCTAAAGTTCACAGATGTGACCTACAAGGTGGTGATTAAAAGCATAACTACAACTAAGGAGAAGGATATCTTGAAGGGGATCACTGGTTCTGTAAATCCTGGGGAAGTTTTGGCATTGATGGGTCCTTCAGGAAGTGGAAAGACATCTTTGTTAAATCTGCTAGGAGGAAGGTTGATTCAATCCACAATTGGTGGCTCTATCACTTACAATGATCAACCTTATTCCAAGTTCCTAAAGAGCAGGATTGGATTCGTGACACAAGATGATGTTCTGTTTCCTCACCTTACTGAGTATGAAAACAGGTGCCAAGACACTATGATAGGAGGTTCCTATGTTCGAGGAATATCTGGTGGAGAGAGGAAGAGAGTTTGTATTGGCAATGAGATCATAATCAACCCTTCACTTCTGTTTCTTGATGAACCAACTTCTGGTTTGGATTCTACAACAGCCTTAAGGATAGTTCAGATGCTACAAGACATAGCAGAGGCTGGTAAAACCGTAGTGACAACAATCCATCAACCATCAAGCAGACTCTTTCATAAATTTGATAAGTTGATCCTTCTAGGAAAAGGGAGTTTGCTTTACTTTGGAAAAGCATCTGATGCAATGGACTATTTCCAGTTTATAGGCTGTGCACCTCTTATTGCCATGAACCCAGCAGAGTTTTTATTAGACCTTGCAAATGGAAACGTAAATGATATTTCTGTGCCATCAGAGTTAAAGGATAAAGTGCAGGTAGGAAATGCTGAAGCTGAAACATGCAATGGGAAACCATCAGCTTCAGTTGTACAAGAGTATCTGGTGGAGGCATATGATTCTCGAGTTGCAGAAATAGAGAAGACAAAGTTAATGGTTCCTGTCCCCCTTGATGAAGAACTGAAGTCTAAGGTTTGTTCTTGTAAAAGGCAGTGGGGAGCAAGTTGGTTTGAGCAATTTTCCATATTATTTTCAAGAGGATTCAAAGAACGGAGGCATGACTACTTCAGCTGGTTGAGAATCACCCAAGTTCTATCCACTGCAGTCATCTTAGGATTACTCTGGTGGCAATCAGATGCTAAAACCCCAAAAGGTTTGCAAGACCAGGCAGGACTGCTTTTCTTTATTGCTGTGTTTTGGGGATTTTTTCCTGTCTTCACTGCAATATTCACATTTCCTCAAGAGAGAGCCATGCTGACTAAGGAGCGAACAACGGATATGTACAGACTAAGTGCATATTTCGTGGCTAGAACTACAAGTGACCTTCTACTAGACCTGGTGCTACCAGTGTTTTTCCTCCTCGTTGTTTATTTCATGGCCAATTTGAGACTCGGTTCAGGGTGCTTTTTCCTTAGTATTCTTACCGTTTTTCTCTGCATCATAGCAGCTCAGGGGCTTGGACTTGCTATCGGGGCTACACTAATGGACTTGAAAAGGGCAACAACGTTGGCTTCAGTAACTGTGATGACTTTCATGCTGGCTGGAGGTTTTTTTGTCAAGAAAGTTCCCATATTTATATCATGGATTCGCTACATATCTTTCAACTACCATACGTATAAACTTTTGCTCAAGGTTCAATATGAACACATTACACCTACCATAAATGGGATCAGAATTGACAGTGGATTCACAGAGGTTGCTGCTCTGACAGCCATGGTTTTTGGTTACCGTTTATTGGCATATCTTTCATTGCGGCGGATGAAACTTCAAGCTGGAAATTAA 2109 0.4395 MENASTSSLARTKSDQLAETVATTAVKSSPPSAEGGGTLSRKSSRRMTTASPGGKNTHIRKARSAQLKVDVDEVSSGVALSRASSASLGLSFSFTGFTLPPDEIADSKPFSDDDIPEDVEARTQKPKFQTEPTLPIYLKFTDVTYKVVIKSITTTKEKDILKGITGSVNPGEVLALMGPSGSGKTSLLNLLGGRLIQSTIGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTEYENRCQDTMIGGSYVRGISGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASDAMDYFQFIGCAPLIAMNPAEFLLDLANGNVNDISVPSELKDKVQVGNAEAETCNGKPSASVVQEYLVEAYDSRVAEIEKTKLMVPVPLDEELKSKVCSCKRQWGASWFEQFSILFSRGFKERRHDYFSWLRITQVLSTAVILGLLWWQSDAKTPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLTKERTTDMYRLSAYFVARTTSDLLLDLVLPVFFLLVVYFMANLRLGSGCFFLSILTVFLCIIAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKKVPIFISWIRYISFNYHTYKLLLKVQYEHITPTINGIRIDSGFTEVAALTAMVFGYRLLAYLSLRRMKLQAGN 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03294 702 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 238 690 - -
Pumo5g03294 702 CDD ABCG_EPDR 135 334 - -
Pumo5g03294 702 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 138 352 IPR003439 GO:0005524
Pumo5g03294 702 SMART AAA_5 170 329 IPR003593 GO:0016887
Pumo5g03294 702 MobiDBLite consensus disorder prediction 1 64 - -
Pumo5g03294 702 ProSitePatterns ABC transporters family signature. 252 266 IPR017871 GO:0005524|GO:0016887
Pumo5g03294 702 MobiDBLite consensus disorder prediction 1 55 - -
Pumo5g03294 702 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 360 IPR027417 -
Pumo5g03294 702 Pfam ABC-2 type transporter 447 656 IPR013525 GO:0016020|GO:0140359
Pumo5g03294 702 Pfam ABC transporter 161 280 IPR003439 GO:0005524
Pumo5g03294 702 Gene3D - 138 239 IPR027417 -
Pumo5g03294 702 Gene3D - 240 346 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03294 Pumo-Chr5 82133412 82141420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03294 160 381 Calmodulin-binding Proteins AT2G36910 25.882 8.56e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03294 K05681 - gmx:100796008 1246.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03294 5 82133412 82141420 Pumo3g02957 3 52823691 52835333 PCT