Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03262 ATGCTCCACCCGTCCCCAACACTCCTCCTCCTCCTCCTCCTCTTTTTTTCCCTCTCCTCCGCCGACCCGAACGACGCCAAAATCCTGCGGCAATTCCGAAACGGCTTGGACAACCCAGAACTACTGCCGTGGCCGGACGAGGACGACGACCCATGTGGCTGGAAATACATTTTCTGCGACAGCAACAAACGCGTGAACCAGATTCAACCCAAGGGCTTAAACCTTAGCGGTCCCTTGCCGCAGAACCTGAACCAGCTCGCCATGCTCACCAACGTGGGCCTCCAGAACAACAGGCTGAACGGCCCATTACCCTCCTTCCGCGGCCTGTCCAATCTCAAATACGCGTACCTCGACAACAACAACTTCGACTCCATCCCCTCCGATTTCTTCGACGGGCTCGAGAGTCTAGAAGTGTTGGCCTTGGACCATAATAACCTCAACGCCAGCACTGGCGGGTGGAACTTACCCGAAACGCTCCAGGGGTCAACGCAGTTGACCAACTTCTCTTGTATGGGCTGCAACCTCGCCGGCCCAATACCCGAATTTCTCGGAACCATGAACTCGCTGTCGTTTTTGAAGCTTTCTAACAACAACTTAACGGGTGAGATTCCGCGGAGCTTAAACGGCTCCGCGTTGCAGGTTCTGTGGTTGAACAACCAGCAGGGTGAGCGTCTCAGTGGGGGAATTGATATTGTGGCCACTATGATTTCGCTCACGAGTTTGTGGCTTCATGGAAACGCTTTCACTGGGACAATTCCCGAGAACATTGGGGATTTGAGGTCTTTGAAGGATCTCAACCTTAACGGGAACAACCTCGTTGGGTTGGTTCCTCAAGGTTTGGGCGACATGAAACTGGACAACCTGGATTTGAACAATAACCATTTCATGGGTCCGATTCCGAATTTTAAAGCAACTACAGTGTCGTATGATAATAATGTTTTTTGTGTGAGCAAACCGGGGTTTCCTTGTGCGTTTGAGGTGATGGCTTTGTTAGGATTTCTTGGTGGGTTGAATTATCCTCAAAATTTGGTTGATTCGTGGACTGGGAATGATCCTTGTGGGGAGCATTGGTTGGGGATAAAGTGCAATGTTGATGGGAAGGTGAATGTGATTAATTTGCCTAATTTGAATCTTAGTGGGAGTTTAAGTGCTTCTGTCGCGAACTTGGGTTCTCTTGTTGAGATTAGGTTGGCGGGGAATGATATTAGTGGTGTGGTGCCTGGTAATTGGAGTAGTTTGACATCTTTGAAATTCTTGGATCTGAGTGGGAATAACATTTCTCCTCCACTGCCTGACTTTAAGACTGGATTGAAACCTATTATTGTGGGGAATCCTCTGTTGAATGGTGGAGCGAAAACTACTCCTTCAGGGAAGGATAACCCGTCATCTGGATCTGGGAATGTTGAGCCTTCAGGGAACAATAACTCGAATTCTAGTTCGAGTGATTCTCATGAAACTAAGAAATCCAAAAGGAAAGAGTTGGTTTCGATTGTTGCTCCGATTGTGGGTGTGGCGGCTGCGGCTTTTCTGCTCATTCCACTCTATGCATATTGTTTCAGGAGGAGGAAGGGTGGCTTCCAGTCTCCAACTTCGCTGGTAATTCATCCTAGAGATCCATCGGATTCGGATAGTGCTGTGAAGATTGTTGTTGCTAATAATACCAATGGAAGCATTTCCACTTTTACAGGGAGTGGGTCTGGGAGTAGGAATAGTAGTGGAATTAGGGAGTCTCATGTCATTGAAGCTGGAAATCTTAGGATATCAGTTCAGGTTCTGAGGAATGTGACCAAGAATTTTGCACCCGAGAATGAGCTTGGCCGTGGTGGATTTGGGGTTGTTTATAAGGGAGAGTTGGATGATGGAACTAAAATTGCAGTGAAACGAATGGAGGCAGGTGTGATTAGTAGCAAGGCCTTGGATGAATTCCAGTCTGAGATTGCAGTTCTATCAAAAGTCCGGCACCGGCATCTGGTGTCTCTTTTGGGTTATTGTATAGAAGGTAATGAAAGAATTCTAGTCTATGAGTATATGCCCCAAGGGGCTCTCAGTAAGCATCTTTTCCATTGGAAGAGCAATGAACTGGAGCCCCTCTCTTGGAAGAGGAGACTCAATATTGCCTTGGATGTTGCTAGAGGGATGGAGTATCTTCATAATCTGGCTCACCAGAGCTTCATTCACAGAGATCTTAAGCCATCAAATATCTTGCTTGCTGATGATTTCAGGGCAAAAGTGTCAGATTTTGGATTGGTAAAACTTGCTCCTGAAGGCGAAAAACCATCTGTAGTGACCCGGCTCGCTGGGACTTTTGGATATTTGGCGCCAGAATATGCAGTGACAGGAAAAATCACTACCAAAGCAGATGTTTTTAGTTTCGGGGTTGTGCTAATGGAGCTGTTGACCGGATTGATGGCACTTGATGAGGATAGACCTGAGGAAAGCCAATACTTGGCAGCATGGTTCTGGCATATAAAATCAGATAAGAAGAAACTAATGGCTGCTATTGACCCGGCCCTTGATGTAAAGGAAGAAACATTTGAGAGCATCTCCATTATTGCTGAGCTAGCAGGGCACTGCACTGCCAGAGAACCAAGCCAACGACCAGATATGGGTCATGCCGTGAATGTGCTGGCACCACTTGTCGAGAAATGGAAACCCTTTGATGATGACACCGAGGAGTATTCCGGCATCGATTATAGTCTTCCCCTTAACCAGATGGTGAAGGGATGGCAAGAGGCAGAAGGAAAGGACTTGAGTTATATGGACCTAGAAGACAGTAAGAGTAGTATCCCTGCAAGGCCTACTGGATTTGCAGATTCTTTTACTTCAGCTGATGGCCGGTGA 2841 0.4727 MLHPSPTLLLLLLLFFSLSSADPNDAKILRQFRNGLDNPELLPWPDEDDDPCGWKYIFCDSNKRVNQIQPKGLNLSGPLPQNLNQLAMLTNVGLQNNRLNGPLPSFRGLSNLKYAYLDNNNFDSIPSDFFDGLESLEVLALDHNNLNASTGGWNLPETLQGSTQLTNFSCMGCNLAGPIPEFLGTMNSLSFLKLSNNNLTGEIPRSLNGSALQVLWLNNQQGERLSGGIDIVATMISLTSLWLHGNAFTGTIPENIGDLRSLKDLNLNGNNLVGLVPQGLGDMKLDNLDLNNNHFMGPIPNFKATTVSYDNNVFCVSKPGFPCAFEVMALLGFLGGLNYPQNLVDSWTGNDPCGEHWLGIKCNVDGKVNVINLPNLNLSGSLSASVANLGSLVEIRLAGNDISGVVPGNWSSLTSLKFLDLSGNNISPPLPDFKTGLKPIIVGNPLLNGGAKTTPSGKDNPSSGSGNVEPSGNNNSNSSSSDSHETKKSKRKELVSIVAPIVGVAAAAFLLIPLYAYCFRRRKGGFQSPTSLVIHPRDPSDSDSAVKIVVANNTNGSISTFTGSGSGSRNSSGIRESHVIEAGNLRISVQVLRNVTKNFAPENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISSKALDEFQSEIAVLSKVRHRHLVSLLGYCIEGNERILVYEYMPQGALSKHLFHWKSNELEPLSWKRRLNIALDVARGMEYLHNLAHQSFIHRDLKPSNILLADDFRAKVSDFGLVKLAPEGEKPSVVTRLAGTFGYLAPEYAVTGKITTKADVFSFGVVLMELLTGLMALDEDRPEESQYLAAWFWHIKSDKKKLMAAIDPALDVKEETFESISIIAELAGHCTAREPSQRPDMGHAVNVLAPLVEKWKPFDDDTEEYSGIDYSLPLNQMVKGWQEAEGKDLSYMDLEDSKSSIPARPTGFADSFTSADGR 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03262 946 Gene3D Ribonuclease Inhibitor 325 446 IPR032675 -
Pumo5g03262 946 MobiDBLite consensus disorder prediction 448 488 - -
Pumo5g03262 946 Gene3D Ribonuclease Inhibitor 22 320 IPR032675 -
Pumo5g03262 946 Gene3D Transferase(Phosphotransferase) domain 1 677 896 - -
Pumo5g03262 946 ProSiteProfiles Protein kinase domain profile. 599 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g03262 946 Gene3D Phosphorylase Kinase; domain 1 563 676 - -
Pumo5g03262 946 Pfam Protein tyrosine and serine/threonine kinase 602 874 IPR001245 GO:0004672|GO:0006468
Pumo5g03262 946 Pfam Leucine rich repeat N-terminal domain 327 363 IPR013210 -
Pumo5g03262 946 Pfam Leucine rich repeat N-terminal domain 23 60 IPR013210 -
Pumo5g03262 946 CDD STKc_IRAK 605 879 - -
Pumo5g03262 946 FunFam Receptor-like kinase TMK4 23 320 - -
Pumo5g03262 946 ProSitePatterns Protein kinases ATP-binding region signature. 605 627 IPR017441 GO:0005524
Pumo5g03262 946 SMART LRR_typ_2 186 210 IPR003591 -
Pumo5g03262 946 SMART LRR_typ_2 413 435 IPR003591 -
Pumo5g03262 946 SMART LRR_typ_2 109 132 IPR003591 -
Pumo5g03262 946 SMART LRR_typ_2 133 161 IPR003591 -
Pumo5g03262 946 SMART LRR_typ_2 235 258 IPR003591 -
Pumo5g03262 946 SMART LRR_typ_2 389 412 IPR003591 -
Pumo5g03262 946 SMART LRR_typ_2 259 282 IPR003591 -
Pumo5g03262 946 PANTHER OSJNBA0070M12.3 PROTEIN 8 946 - -
Pumo5g03262 946 SUPERFAMILY L domain-like 326 438 - -
Pumo5g03262 946 SUPERFAMILY Protein kinase-like (PK-like) 574 876 IPR011009 -
Pumo5g03262 946 SUPERFAMILY L domain-like 21 302 - -
Pumo5g03262 946 Pfam Leucine rich repeat 237 295 IPR001611 GO:0005515
Pumo5g03262 946 Pfam Leucine rich repeat 89 146 IPR001611 GO:0005515
Pumo5g03262 946 FunFam receptor protein kinase TMK1 561 676 - -
Pumo5g03262 946 FunFam Leucine-rich repeat receptor-like kinase 325 450 - -
Pumo5g03262 946 FunFam receptor protein kinase TMK1 677 895 - -
Pumo5g03262 946 SMART serkin_6 599 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g03262 946 ProSitePatterns Serine/Threonine protein kinases active-site signature. 724 736 IPR008271 GO:0004672|GO:0006468
Pumo5g03262 946 MobiDBLite consensus disorder prediction 449 482 - -
Pumo5g03262 946 MobiDBLite consensus disorder prediction 924 946 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03262 Pumo-Chr5 81695850 81699514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03262 74 881 Receptor kinase-like Gene Family AT5G07280 33.093 3.62e-85 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pumo5g03262 PK_Tyr_Ser-Thr 5.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03262 - - gmx:100305366 1597.41