Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03255 ATGGCCGATAAGCACGGAAGAAGCTGCTGTTGCTGCCTCTTCGGAATCTTGTGGAAGATTCTGTTTGCACTCATTGTCCTCGTTGGTCTCGCAATCCTCATTTTCTGGTTGGTCGTTCAACCCCGCTCCTTCAAGTTCCATGTCACGAAAGCCGACCTAACCCAATTTGATTACTATACCAACAACAACACCCTCCACTACAACATGGTCCTCAACTTCACTGCACGCAACCCCAACAAAAAACTCAGCATCTACTACGACAAAGTAGAGGCATTAGCATTCTACGAGGACGCCAGGTTCGCCAATTACGATGTCATCACTCATATGAACTCCTTCCGCCAGTACAAGAAGAGCACCAGCCCCATGAGTGCAGTTTTCTCAGGGCAGAAAGTGTTGATGCTCGACAATGACCAAGTCTCTGAGTTCAACAAAGACAAAAGTGCTGGGGTTTACGACATATATGTGAAGCTGAACTTCAGGATCAGGTTCAGGCTCGGGGACGTGATATCCGGTGACTACAAGCCCAAGGTCAAATGTGACCTCAAGGTTCCTTTGAGTAAAAATAGCACTTTTACTATGTTTGAGACCACCAACTGTCGCGTCAATTTCTAG 612 0.469 MADKHGRSCCCCLFGILWKILFALIVLVGLAILIFWLVVQPRSFKFHVTKADLTQFDYYTNNNTLHYNMVLNFTARNPNKKLSIYYDKVEALAFYEDARFANYDVITHMNSFRQYKKSTSPMSAVFSGQKVLMLDNDQVSEFNKDKSAGVYDIYVKLNFRIRFRLGDVISGDYKPKVKCDLKVPLSKNSTFTMFETTNCRVNF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03255 203 Pfam Late embryogenesis abundant protein 73 177 IPR004864 -
Pumo5g03255 203 PANTHER OS05G0367900 PROTEIN 8 186 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03255 Pumo-Chr5 81619439 81620180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03255 38 190 SNARE and Associated Proteins AT1G32270 35.897 6.83e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03255 - - gmx:547482 364.385