Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03254 ATGGCCGATAAGCAACCCCACTTGAACGGTGCTTATTACGGTCCCGCCATTCCCCCAGCGCAACAACCACGCCACCCCCCTCACCGCGGAAGAAGCTGCTGTTGCTGCCTATTCGGAATCTTGTGGAAGATTCTGGTTGCACTCATTGTCCTCGTTGGTCTTGCAATCCTCATTTTCTGGCTTGTGGTTCAACCTCGCTCCTTCAAGTTCCATGTCACGAAAGCCGACCTAACCCAATTTGATTACTATACCAACAACACCACCCTCCACTACAACATGGCCCTCAACTTCACTGCACGCAACCCCAACAAGAAGCTCAGCATATACTACGACAAAGTAGAAGCATTAGCATTCTACGAGGACGCCAGGTTCGCCAATTACGATGTCATCACTCACATGAACTCCTTCCGCCAGTACAAGAAGAGCACCAACCCCATGAGCGCTGTTTTCTCGGGCCAGCAATTGCTGATGCTAGACAATGACCAAGTCTCTGAGTTCAACAAAGACACGAGTGCTGGGGTTTATGACATCTATGTTAAGCTCTACTTCAGGATTCGGTTCAGGCTTGGGGATGTCATATCCAATGACTACAAGCCCAAGGTCAAATGTCACCTCAAGGTTCCTTTTAGTAAAAATGGCACCTTTACTCTGTTTCAGACCACCAAGTGTGATGTCGATTTCTAG 684 0.4868 MADKQPHLNGAYYGPAIPPAQQPRHPPHRGRSCCCCLFGILWKILVALIVLVGLAILIFWLVVQPRSFKFHVTKADLTQFDYYTNNTTLHYNMALNFTARNPNKKLSIYYDKVEALAFYEDARFANYDVITHMNSFRQYKKSTNPMSAVFSGQQLLMLDNDQVSEFNKDTSAGVYDIYVKLYFRIRFRLGDVISNDYKPKVKCHLKVPFSKNGTFTLFQTTKCDVDF 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03254 227 Pfam Late embryogenesis abundant protein 97 203 IPR004864 -
Pumo5g03254 227 PANTHER OS05G0367900 PROTEIN 32 209 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03254 Pumo-Chr5 81615425 81616389 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03254 62 210 SNARE and Associated Proteins AT1G32270 34.899 2.58e-22 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03254 - - gmx:100807701 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03254 5 81615425 81616389 Pumo3g03034 3 55012513 55013636 PCT