Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03253 ATGGCTGATTATAAGCAACACCACGGAAGAAGCTGCTGCTGCAGCCTCTTCGGAATCTTGTGGAAGATTCTGGTTGCACTAATTGTCCTCGTTGGGCTTGCAATCCTCATCTTCTGGTTGGTGGTCCAACCCCGCTCCTTCAAGTTCAATGTTACGGAAGCGGACCTAACCCAATTTGATTACTATAGCAACAACAACACCCTCCATTACAACATGGTCCTCAACTTCACTGCACGCAACCCCAACAAGAAGCTCAGCATATACTACGACAAAGTAGAGGCATTAGCATTCTACGAGGACGCCAGGTTCGCCAATTACGATGTCATCACTCACATGAACTCCTTCCGCCAGTACAAGAAGAGCACCAGCCCCATGAGCGCCGTTTTCTCAGGGCAGAAAGTGTTGATGCTTGACAATGAACGAGTCTCTAAGTTGAACCAAGACAAGAGTGGTGGGGTTTATGACATCTATGTGAAGCTCTACTTCAGGATTAGGTTCAGGCTCGGGGATTCGATATCCCGTCACTTAAAGCCCAAGGTCAAATGTGATCTCAAGGTTCCCTTCAGTAAAATTGGCACCGTAACTCTCTTTCAGACCACCAAATGTTCTGTGCATTTCTAA 621 0.4702 MADYKQHHGRSCCCSLFGILWKILVALIVLVGLAILIFWLVVQPRSFKFNVTEADLTQFDYYSNNNTLHYNMVLNFTARNPNKKLSIYYDKVEALAFYEDARFANYDVITHMNSFRQYKKSTSPMSAVFSGQKVLMLDNERVSKLNQDKSGGVYDIYVKLYFRIRFRLGDSISRHLKPKVKCDLKVPFSKIGTVTLFQTTKCSVHF 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03253 206 Pfam Late embryogenesis abundant protein 76 182 IPR004864 -
Pumo5g03253 206 PANTHER OS05G0367900 PROTEIN 12 193 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03253 Pumo-Chr5 81597678 81601147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03253 41 189 SNARE and Associated Proteins AT1G32270 34.899 6.52e-21 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03253 - - gmx:100806990 367.851