Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03244 ATGTTAGCAACAAGTACTCACGGAAACACAGAAACCACAGCAATGTCTGGCTCCAGAAAGAAGCTTCTTCTGAACACCGTGTCTGTGAAACTAGGCTGCGGTACCTGCAGAAGATCAAAGCTGTGTCGCATATTCCACCCAAAGCCAAAACCCAAGAACAACAACAACGTGCCCACTACTTACCAAAAGCACTACAAACATTCTTCTTCTTCTTGTTCCTTTTTTTCAGGCCAATGGGGTGACAGCACCAGCACCACCCCCACCAACACCAACACCAACACCAACACCACATTCTCACCCTACGTTGATTCCTCACACTTCTCTGACTCAGATTCATACGTGAAGGCTGTGGGGGGTTTGGGCAGAGCTGGGAAAGAAGGTGTGGCTGTGGAGAAAGACTCTGATGACCCTTATCTTGATTTCAGACATTCCATGCTGCAAATGATATTGGAGAATGAGATATACTCCAAGCAAGATCTCAGAGAGCTTCTGAATTGTTTTCTTCAGCTGAATTCACCGCATCACCATGGGGTTATAGTCAGAGCTTTCACTGAGATCTGGAATGGGGTTTTCTCTTTGAGGTCCAGTTCACACACCAACCGTAAGCCACGTGACTTCTAA 621 0.4654 MLATSTHGNTETTAMSGSRKKLLLNTVSVKLGCGTCRRSKLCRIFHPKPKPKNNNNVPTTYQKHYKHSSSSCSFFSGQWGDSTSTTPTNTNTNTNTTFSPYVDSSHFSDSDSYVKAVGGLGRAGKEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKQDLRELLNCFLQLNSPHHHGVIVRAFTEIWNGVFSLRSSSHTNRKPRDF 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03244 206 Pfam Transcriptional repressor, ovate 134 190 IPR006458 -
Pumo5g03244 206 NCBIfam uncharacterized plant-specific domain TIGR01568 128 188 IPR006458 -
Pumo5g03244 206 ProSiteProfiles OVATE domain profile. 130 189 IPR006458 -
Pumo5g03244 206 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 52 192 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03244 Pumo-Chr5 81463996 81464873 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pumo5g03244 Ovate 4.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03244 - - gmx:106797222 322.398