Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03207 ATGTTAGGAAAAAAGATGGTATCATTCAAGAAACTGGCAAAAAAGGTGAAGAGTGTTGGTGGAGTTGACCCTGACCCTGACCCTGCACATCACGAGTGTTTGCTCAAGGAATATGAAGAAAAATGTGCCACTAACACACCCCCAACTGGGTTTTTCGCACTTTATGTTGGGGAAGAGCGTCAGAGATATGTGGTTCCTACCCGCTACCTTTCTCACCCGTTATTCAAGATGCTGTTGGAGAAGGCATACAATGAGTTTGGGTTTTCTCAGAGGAATGGCCTGGTAGTTCCATGCAGTGTTTCCATATTTCAGGAGGTGGTGAATGCTATAGAATGCAACAACGGCAAGTTTGACTTGGGGAAACTTTTTGAAGAATTTGTTTGA 384 0.4375 MLGKKMVSFKKLAKKVKSVGGVDPDPDPAHHECLLKEYEEKCATNTPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKAYNEFGFSQRNGLVVPCSVSIFQEVVNAIECNNGKFDLGKLFEEFV 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03207 127 Pfam Auxin responsive protein 37 109 IPR003676 GO:0009733
Pumo5g03207 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03207 Pumo-Chr5 81018715 81019387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03207 39 113 Calmodulin-binding Proteins AT5G20810 48.101 3.63e-20 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03207 K14488 - gmx:100776885 242.662