Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03197 ATGAAGAAGTGCGAACTGTGCAAGGTTCCGGCGAGGATTTTTTATGAGTCGGACCAGGCAAGCTTATGCTGGGACTACGACATGAAGGTTCACAAGCGCCAACTTCTTGGTCGCGAGGCACTCCTGAACCTACTCTGCCTCACATGCCTCTCTCCCAATCCGTGGAAGGCCTCCGACGCCACACTCGCCAGCGCTGCCTCTGTCTGCGACCGTTGCGCCGCTGCGGATGAACCGAAGGAGAAGCGAAGCAGGTTGACATTATATTGTTGTATGGGGGTTACCATACAGGTGTATGTTGAAGTTGGCATAGATGAAAGTGGTTATGAGCATGGTGCTGGTGTTGAAAGCGTGATGTGTGAAGAAGAGTAA 369 0.523 MKKCELCKVPARIFYESDQASLCWDYDMKVHKRQLLGREALLNLLCLTCLSPNPWKASDATLASAASVCDRCAAADEPKEKRSRLTLYCCMGVTIQVYVEVGIDESGYEHGAGVESVMCEEE 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03197 122 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03197 Pumo-Chr5 80904137 80907549 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03197 2 74 C2C2-CO-like Transcription Factor Family AT5G54470 52.055 2.47e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03197 - - gmx:100782655 120.168